Gene : Brara.A01420 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10992//PTHR10992:SF866 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN Genomic Order:  1420
Name:  ? Brara.A01420 Secondary Identifier:  ? PAC:30637670
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY0-1319 Brassica rapa FPsc pathologic  
BrapaFPsc PWY4FS-7 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7411 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7417 Brassica rapa FPsc pathologic  
BrapaFPsc TRIGLSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01420 0.5kb upstream 0.5kb upstream 3823 true A01: 7882442-7886264 Brassica rapa FPsc
Brara.A01420 0.5kb upstream 0.5kb upstream 500 false A01: 7882442-7882941 Brassica rapa FPsc
Brara.A01420 0.5kb downstream 0.5kb downstream 3823 true A01: 7882942-7886764 Brassica rapa FPsc
Brara.A01420 0.5kb downstream 0.5kb downstream 500 false A01: 7886265-7886764 Brassica rapa FPsc
Brara.A01420 1.0kb upstream 1.0kb upstream 4323 true A01: 7881942-7886264 Brassica rapa FPsc
Brara.A01420 1.0kb upstream 1.0kb upstream 1000 false A01: 7881942-7882941 Brassica rapa FPsc
Brara.A01420 1.0kb downstream 1.0kb downstream 4323 true A01: 7882942-7887264 Brassica rapa FPsc
Brara.A01420 1.0kb downstream 1.0kb downstream 1000 false A01: 7886265-7887264 Brassica rapa FPsc
Brara.A01420 2.0kb upstream 2.0kb upstream 5323 true A01: 7880942-7886264 Brassica rapa FPsc
Brara.A01420 2.0kb upstream 2.0kb upstream 2000 false A01: 7880942-7882941 Brassica rapa FPsc
Brara.A01420 2.0kb downstream 2.0kb downstream 5323 true A01: 7882942-7888264 Brassica rapa FPsc
Brara.A01420 2.0kb downstream 2.0kb downstream 2000 false A01: 7886265-7888264 Brassica rapa FPsc
Brara.A01420 5.0kb upstream 5.0kb upstream 8323 true A01: 7877942-7886264 Brassica rapa FPsc
Brara.A01420 5.0kb upstream 5.0kb upstream 5000 false A01: 7877942-7882941 Brassica rapa FPsc
Brara.A01420 5.0kb downstream 5.0kb downstream 8323 true A01: 7882942-7891264 Brassica rapa FPsc
Brara.A01420 5.0kb downstream 5.0kb downstream 5000 false A01: 7886265-7891264 Brassica rapa FPsc
Brara.A01420 10.0kb upstream 10.0kb upstream 13323 true A01: 7872942-7886264 Brassica rapa FPsc
Brara.A01420 10.0kb upstream 10.0kb upstream 10000 false A01: 7872942-7882941 Brassica rapa FPsc
Brara.A01420 10.0kb downstream 10.0kb downstream 13323 true A01: 7882942-7896264 Brassica rapa FPsc
Brara.A01420 10.0kb downstream 10.0kb downstream 10000 false A01: 7886265-7896264 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364602 5261 Brassicaceae View MSA
123840000 5264 Brassicales-Malvales View MSA
124344774 5266 SBM View MSA
124237446 5268 Malvidae View MSA
124066617 5270 Rosid View MSA
123747247 5271 Pentapetalae View MSA
122792153 5272 Eudicot View MSA
122042998 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121347708 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier