Gene : Brara.D00631 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10909:SF331 - ACYL-COENZYME A OXIDASE 4, PEROXISOMAL Genomic Order:  631
Name:  ? Brara.D00631 Secondary Identifier:  ? PAC:30621863
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5136 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6837 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-735 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7606 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00631 0.5kb upstream 0.5kb upstream 3634 true A04: 4934246-4937879 Brassica rapa FPsc
Brara.D00631 0.5kb upstream 0.5kb upstream 500 false A04: 4934246-4934745 Brassica rapa FPsc
Brara.D00631 0.5kb downstream 0.5kb downstream 3634 true A04: 4934746-4938379 Brassica rapa FPsc
Brara.D00631 0.5kb downstream 0.5kb downstream 500 false A04: 4937880-4938379 Brassica rapa FPsc
Brara.D00631 1.0kb upstream 1.0kb upstream 4134 true A04: 4933746-4937879 Brassica rapa FPsc
Brara.D00631 1.0kb upstream 1.0kb upstream 1000 false A04: 4933746-4934745 Brassica rapa FPsc
Brara.D00631 1.0kb downstream 1.0kb downstream 4134 true A04: 4934746-4938879 Brassica rapa FPsc
Brara.D00631 1.0kb downstream 1.0kb downstream 1000 false A04: 4937880-4938879 Brassica rapa FPsc
Brara.D00631 2.0kb upstream 2.0kb upstream 5134 true A04: 4932746-4937879 Brassica rapa FPsc
Brara.D00631 2.0kb upstream 2.0kb upstream 2000 false A04: 4932746-4934745 Brassica rapa FPsc
Brara.D00631 2.0kb downstream 2.0kb downstream 5134 true A04: 4934746-4939879 Brassica rapa FPsc
Brara.D00631 2.0kb downstream 2.0kb downstream 2000 false A04: 4937880-4939879 Brassica rapa FPsc
Brara.D00631 5.0kb upstream 5.0kb upstream 8134 true A04: 4929746-4937879 Brassica rapa FPsc
Brara.D00631 5.0kb upstream 5.0kb upstream 5000 false A04: 4929746-4934745 Brassica rapa FPsc
Brara.D00631 5.0kb downstream 5.0kb downstream 8134 true A04: 4934746-4942879 Brassica rapa FPsc
Brara.D00631 5.0kb downstream 5.0kb downstream 5000 false A04: 4937880-4942879 Brassica rapa FPsc
Brara.D00631 10.0kb upstream 10.0kb upstream 13134 true A04: 4924746-4937879 Brassica rapa FPsc
Brara.D00631 10.0kb upstream 10.0kb upstream 10000 false A04: 4924746-4934745 Brassica rapa FPsc
Brara.D00631 10.0kb downstream 10.0kb downstream 13134 true A04: 4934746-4947879 Brassica rapa FPsc
Brara.D00631 10.0kb downstream 10.0kb downstream 10000 false A04: 4937880-4947879 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373643 5261 Brassicaceae View MSA
123833749 5264 Brassicales-Malvales View MSA
124350232 5266 SBM View MSA
124245049 5268 Malvidae View MSA
124065996 5270 Rosid View MSA
123739939 5271 Pentapetalae View MSA
122789024 5272 Eudicot View MSA
122043325 5273 Angiosperm View MSA
121347950 5274 Embryophyte View MSA
123424845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier