Gene : Brara.F03545 B. rapa FPsc v1.3
Defline:  (1 of 13) PF05703 - Auxin canalisation (Auxin_canalis) Genomic Order:  3545
Name:  ? Brara.F03545 Secondary Identifier:  ? PAC:30630247
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03545 0.5kb upstream 0.5kb upstream 2100 true A06: 27351407-27353506 Brassica rapa FPsc
Brara.F03545 0.5kb upstream 0.5kb upstream 500 false A06: 27351407-27351906 Brassica rapa FPsc
Brara.F03545 0.5kb downstream 0.5kb downstream 2100 true A06: 27351907-27354006 Brassica rapa FPsc
Brara.F03545 0.5kb downstream 0.5kb downstream 500 false A06: 27353507-27354006 Brassica rapa FPsc
Brara.F03545 1.0kb upstream 1.0kb upstream 2600 true A06: 27350907-27353506 Brassica rapa FPsc
Brara.F03545 1.0kb upstream 1.0kb upstream 1000 false A06: 27350907-27351906 Brassica rapa FPsc
Brara.F03545 1.0kb downstream 1.0kb downstream 2600 true A06: 27351907-27354506 Brassica rapa FPsc
Brara.F03545 1.0kb downstream 1.0kb downstream 1000 false A06: 27353507-27354506 Brassica rapa FPsc
Brara.F03545 2.0kb upstream 2.0kb upstream 3600 true A06: 27349907-27353506 Brassica rapa FPsc
Brara.F03545 2.0kb upstream 2.0kb upstream 2000 false A06: 27349907-27351906 Brassica rapa FPsc
Brara.F03545 2.0kb downstream 2.0kb downstream 3600 true A06: 27351907-27355506 Brassica rapa FPsc
Brara.F03545 2.0kb downstream 2.0kb downstream 2000 false A06: 27353507-27355506 Brassica rapa FPsc
Brara.F03545 5.0kb upstream 5.0kb upstream 6600 true A06: 27346907-27353506 Brassica rapa FPsc
Brara.F03545 5.0kb upstream 5.0kb upstream 5000 false A06: 27346907-27351906 Brassica rapa FPsc
Brara.F03545 5.0kb downstream 5.0kb downstream 6600 true A06: 27351907-27358506 Brassica rapa FPsc
Brara.F03545 5.0kb downstream 5.0kb downstream 5000 false A06: 27353507-27358506 Brassica rapa FPsc
Brara.F03545 10.0kb upstream 10.0kb upstream 11600 true A06: 27341907-27353506 Brassica rapa FPsc
Brara.F03545 10.0kb upstream 10.0kb upstream 10000 false A06: 27341907-27351906 Brassica rapa FPsc
Brara.F03545 10.0kb downstream 10.0kb downstream 11600 true A06: 27351907-27363506 Brassica rapa FPsc
Brara.F03545 10.0kb downstream 10.0kb downstream 10000 false A06: 27353507-27363506 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363832 5261 Brassicaceae View MSA
123798624 5264 Brassicales-Malvales View MSA
124296234 5266 SBM View MSA
124148445 5268 Malvidae View MSA
123874435 5270 Rosid View MSA
123458408 5271 Pentapetalae View MSA
122493813 5272 Eudicot View MSA
122048590 5273 Angiosperm View MSA
121311030 5274 Embryophyte View MSA
123348384 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier