Gene : Brara.F03616 B. rapa FPsc v1.3

Defline:  (1 of 2) PTHR32387:SF3 - ATP/DNA BINDING PROTEIN Genomic Order:  3616
Name:  ? Brara.F03616 Secondary Identifier:  ? PAC:30628508

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03616 0.5kb upstream 0.5kb upstream 6464 true A06: 27741907-27748370 Brassica rapa FPsc
Brara.F03616 0.5kb upstream 0.5kb upstream 500 false A06: 27747871-27748370 Brassica rapa FPsc
Brara.F03616 0.5kb downstream 0.5kb downstream 6464 true A06: 27741407-27747870 Brassica rapa FPsc
Brara.F03616 0.5kb downstream 0.5kb downstream 500 false A06: 27741407-27741906 Brassica rapa FPsc
Brara.F03616 1.0kb upstream 1.0kb upstream 6964 true A06: 27741907-27748870 Brassica rapa FPsc
Brara.F03616 1.0kb upstream 1.0kb upstream 1000 false A06: 27747871-27748870 Brassica rapa FPsc
Brara.F03616 1.0kb downstream 1.0kb downstream 6964 true A06: 27740907-27747870 Brassica rapa FPsc
Brara.F03616 1.0kb downstream 1.0kb downstream 1000 false A06: 27740907-27741906 Brassica rapa FPsc
Brara.F03616 2.0kb upstream 2.0kb upstream 7964 true A06: 27741907-27749870 Brassica rapa FPsc
Brara.F03616 2.0kb upstream 2.0kb upstream 2000 false A06: 27747871-27749870 Brassica rapa FPsc
Brara.F03616 2.0kb downstream 2.0kb downstream 7964 true A06: 27739907-27747870 Brassica rapa FPsc
Brara.F03616 2.0kb downstream 2.0kb downstream 2000 false A06: 27739907-27741906 Brassica rapa FPsc
Brara.F03616 5.0kb upstream 5.0kb upstream 10964 true A06: 27741907-27752870 Brassica rapa FPsc
Brara.F03616 5.0kb upstream 5.0kb upstream 5000 false A06: 27747871-27752870 Brassica rapa FPsc
Brara.F03616 5.0kb downstream 5.0kb downstream 10964 true A06: 27736907-27747870 Brassica rapa FPsc
Brara.F03616 5.0kb downstream 5.0kb downstream 5000 false A06: 27736907-27741906 Brassica rapa FPsc
Brara.F03616 10.0kb upstream 10.0kb upstream 15964 true A06: 27741907-27757870 Brassica rapa FPsc
Brara.F03616 10.0kb upstream 10.0kb upstream 10000 false A06: 27747871-27757870 Brassica rapa FPsc
Brara.F03616 10.0kb downstream 10.0kb downstream 15964 true A06: 27731907-27747870 Brassica rapa FPsc
Brara.F03616 10.0kb downstream 10.0kb downstream 10000 false A06: 27731907-27741906 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376881 5261 Brassicaceae View MSA
123827678 5264 Brassicales-Malvales View MSA
124350631 5266 SBM View MSA
124252588 5268 Malvidae View MSA
124072645 5270 Rosid View MSA
123743971 5271 Pentapetalae View MSA
122792746 5272 Eudicot View MSA
122050414 5273 Angiosperm View MSA
121347481 5274 Embryophyte View MSA
123380559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier