Gene : Brara.F03623 B. rapa FPsc v1.3

Defline:  (1 of 1) PTHR17204:SF18 - PRE-MRNA-PROCESSING FACTOR 39 Genomic Order:  3623
Name:  ? Brara.F03623 Secondary Identifier:  ? PAC:30630461

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03623 0.5kb upstream 0.5kb upstream 5208 true A06: 27778225-27783432 Brassica rapa FPsc
Brara.F03623 0.5kb upstream 0.5kb upstream 500 false A06: 27782933-27783432 Brassica rapa FPsc
Brara.F03623 0.5kb downstream 0.5kb downstream 5208 true A06: 27777725-27782932 Brassica rapa FPsc
Brara.F03623 0.5kb downstream 0.5kb downstream 500 false A06: 27777725-27778224 Brassica rapa FPsc
Brara.F03623 1.0kb upstream 1.0kb upstream 5708 true A06: 27778225-27783932 Brassica rapa FPsc
Brara.F03623 1.0kb upstream 1.0kb upstream 1000 false A06: 27782933-27783932 Brassica rapa FPsc
Brara.F03623 1.0kb downstream 1.0kb downstream 5708 true A06: 27777225-27782932 Brassica rapa FPsc
Brara.F03623 1.0kb downstream 1.0kb downstream 1000 false A06: 27777225-27778224 Brassica rapa FPsc
Brara.F03623 2.0kb upstream 2.0kb upstream 6708 true A06: 27778225-27784932 Brassica rapa FPsc
Brara.F03623 2.0kb upstream 2.0kb upstream 2000 false A06: 27782933-27784932 Brassica rapa FPsc
Brara.F03623 2.0kb downstream 2.0kb downstream 6708 true A06: 27776225-27782932 Brassica rapa FPsc
Brara.F03623 2.0kb downstream 2.0kb downstream 2000 false A06: 27776225-27778224 Brassica rapa FPsc
Brara.F03623 5.0kb upstream 5.0kb upstream 9708 true A06: 27778225-27787932 Brassica rapa FPsc
Brara.F03623 5.0kb upstream 5.0kb upstream 5000 false A06: 27782933-27787932 Brassica rapa FPsc
Brara.F03623 5.0kb downstream 5.0kb downstream 9708 true A06: 27773225-27782932 Brassica rapa FPsc
Brara.F03623 5.0kb downstream 5.0kb downstream 5000 false A06: 27773225-27778224 Brassica rapa FPsc
Brara.F03623 10.0kb upstream 10.0kb upstream 14708 true A06: 27778225-27792932 Brassica rapa FPsc
Brara.F03623 10.0kb upstream 10.0kb upstream 10000 false A06: 27782933-27792932 Brassica rapa FPsc
Brara.F03623 10.0kb downstream 10.0kb downstream 14708 true A06: 27768225-27782932 Brassica rapa FPsc
Brara.F03623 10.0kb downstream 10.0kb downstream 10000 false A06: 27768225-27778224 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363665 5261 Brassicaceae View MSA
123829363 5264 Brassicales-Malvales View MSA
124338828 5266 SBM View MSA
124244228 5268 Malvidae View MSA
124069199 5270 Rosid View MSA
123753236 5271 Pentapetalae View MSA
122790404 5272 Eudicot View MSA
122048891 5273 Angiosperm View MSA
121349849 5274 Embryophyte View MSA
123426942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier