Gene : Brara.A02139 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR16166//PTHR16166:SF98 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 Genomic Order:  2139
Name:  ? Brara.A02139 Secondary Identifier:  ? PAC:30639138
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02139 0.5kb upstream 0.5kb upstream 20862 true A01: 13213502-13234363 Brassica rapa FPsc
Brara.A02139 0.5kb upstream 0.5kb upstream 500 false A01: 13213502-13214001 Brassica rapa FPsc
Brara.A02139 0.5kb downstream 0.5kb downstream 20862 true A01: 13214002-13234863 Brassica rapa FPsc
Brara.A02139 0.5kb downstream 0.5kb downstream 500 false A01: 13234364-13234863 Brassica rapa FPsc
Brara.A02139 1.0kb upstream 1.0kb upstream 21362 true A01: 13213002-13234363 Brassica rapa FPsc
Brara.A02139 1.0kb upstream 1.0kb upstream 1000 false A01: 13213002-13214001 Brassica rapa FPsc
Brara.A02139 1.0kb downstream 1.0kb downstream 21362 true A01: 13214002-13235363 Brassica rapa FPsc
Brara.A02139 1.0kb downstream 1.0kb downstream 1000 false A01: 13234364-13235363 Brassica rapa FPsc
Brara.A02139 2.0kb upstream 2.0kb upstream 22362 true A01: 13212002-13234363 Brassica rapa FPsc
Brara.A02139 2.0kb upstream 2.0kb upstream 2000 false A01: 13212002-13214001 Brassica rapa FPsc
Brara.A02139 2.0kb downstream 2.0kb downstream 22362 true A01: 13214002-13236363 Brassica rapa FPsc
Brara.A02139 2.0kb downstream 2.0kb downstream 2000 false A01: 13234364-13236363 Brassica rapa FPsc
Brara.A02139 5.0kb upstream 5.0kb upstream 25362 true A01: 13209002-13234363 Brassica rapa FPsc
Brara.A02139 5.0kb upstream 5.0kb upstream 5000 false A01: 13209002-13214001 Brassica rapa FPsc
Brara.A02139 5.0kb downstream 5.0kb downstream 25362 true A01: 13214002-13239363 Brassica rapa FPsc
Brara.A02139 5.0kb downstream 5.0kb downstream 5000 false A01: 13234364-13239363 Brassica rapa FPsc
Brara.A02139 10.0kb upstream 10.0kb upstream 30362 true A01: 13204002-13234363 Brassica rapa FPsc
Brara.A02139 10.0kb upstream 10.0kb upstream 10000 false A01: 13204002-13214001 Brassica rapa FPsc
Brara.A02139 10.0kb downstream 10.0kb downstream 30362 true A01: 13214002-13244363 Brassica rapa FPsc
Brara.A02139 10.0kb downstream 10.0kb downstream 10000 false A01: 13234364-13244363 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360388 5261 Brassicaceae View MSA
123830490 5264 Brassicales-Malvales View MSA
124337349 5266 SBM View MSA
124238186 5268 Malvidae View MSA
124073517 5270 Rosid View MSA
123745544 5271 Pentapetalae View MSA
122793580 5272 Eudicot View MSA
122042840 5273 Angiosperm View MSA
121343832 5274 Embryophyte View MSA
123379927 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier