Gene : Brara.F03642 B. rapa FPsc v1.3
Defline:  (1 of 35) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  3642
Name:  ? Brara.F03642 Secondary Identifier:  ? PAC:30629935
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03642 0.5kb upstream 0.5kb upstream 2229 true A06: 27887001-27889229 Brassica rapa FPsc
Brara.F03642 0.5kb upstream 0.5kb upstream 500 false A06: 27887001-27887500 Brassica rapa FPsc
Brara.F03642 0.5kb downstream 0.5kb downstream 2229 true A06: 27887501-27889729 Brassica rapa FPsc
Brara.F03642 0.5kb downstream 0.5kb downstream 500 false A06: 27889230-27889729 Brassica rapa FPsc
Brara.F03642 1.0kb upstream 1.0kb upstream 2729 true A06: 27886501-27889229 Brassica rapa FPsc
Brara.F03642 1.0kb upstream 1.0kb upstream 1000 false A06: 27886501-27887500 Brassica rapa FPsc
Brara.F03642 1.0kb downstream 1.0kb downstream 2729 true A06: 27887501-27890229 Brassica rapa FPsc
Brara.F03642 1.0kb downstream 1.0kb downstream 1000 false A06: 27889230-27890229 Brassica rapa FPsc
Brara.F03642 2.0kb upstream 2.0kb upstream 3729 true A06: 27885501-27889229 Brassica rapa FPsc
Brara.F03642 2.0kb upstream 2.0kb upstream 2000 false A06: 27885501-27887500 Brassica rapa FPsc
Brara.F03642 2.0kb downstream 2.0kb downstream 3729 true A06: 27887501-27891229 Brassica rapa FPsc
Brara.F03642 2.0kb downstream 2.0kb downstream 2000 false A06: 27889230-27891229 Brassica rapa FPsc
Brara.F03642 5.0kb upstream 5.0kb upstream 6729 true A06: 27882501-27889229 Brassica rapa FPsc
Brara.F03642 5.0kb upstream 5.0kb upstream 5000 false A06: 27882501-27887500 Brassica rapa FPsc
Brara.F03642 5.0kb downstream 5.0kb downstream 6729 true A06: 27887501-27894229 Brassica rapa FPsc
Brara.F03642 5.0kb downstream 5.0kb downstream 5000 false A06: 27889230-27894229 Brassica rapa FPsc
Brara.F03642 10.0kb upstream 10.0kb upstream 11729 true A06: 27877501-27889229 Brassica rapa FPsc
Brara.F03642 10.0kb upstream 10.0kb upstream 10000 false A06: 27877501-27887500 Brassica rapa FPsc
Brara.F03642 10.0kb downstream 10.0kb downstream 11729 true A06: 27887501-27899229 Brassica rapa FPsc
Brara.F03642 10.0kb downstream 10.0kb downstream 10000 false A06: 27889230-27899229 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360775 5261 Brassicaceae View MSA
123829227 5264 Brassicales-Malvales View MSA
124346453 5266 SBM View MSA
124252725 5268 Malvidae View MSA
124068933 5270 Rosid View MSA
123750623 5271 Pentapetalae View MSA
122791820 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier