Gene : Brara.F03656 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR22952:SF210 - DOG1 ALPHA SPLICE VARIANT Genomic Order:  3656
Name:  ? Brara.F03656 Secondary Identifier:  ? PAC:30630415
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03656 0.5kb upstream 0.5kb upstream 1851 true A06: 27953334-27955184 Brassica rapa FPsc
Brara.F03656 0.5kb upstream 0.5kb upstream 500 false A06: 27953334-27953833 Brassica rapa FPsc
Brara.F03656 0.5kb downstream 0.5kb downstream 1851 true A06: 27953834-27955684 Brassica rapa FPsc
Brara.F03656 0.5kb downstream 0.5kb downstream 500 false A06: 27955185-27955684 Brassica rapa FPsc
Brara.F03656 1.0kb upstream 1.0kb upstream 2351 true A06: 27952834-27955184 Brassica rapa FPsc
Brara.F03656 1.0kb upstream 1.0kb upstream 1000 false A06: 27952834-27953833 Brassica rapa FPsc
Brara.F03656 1.0kb downstream 1.0kb downstream 2351 true A06: 27953834-27956184 Brassica rapa FPsc
Brara.F03656 1.0kb downstream 1.0kb downstream 1000 false A06: 27955185-27956184 Brassica rapa FPsc
Brara.F03656 2.0kb upstream 2.0kb upstream 3351 true A06: 27951834-27955184 Brassica rapa FPsc
Brara.F03656 2.0kb upstream 2.0kb upstream 2000 false A06: 27951834-27953833 Brassica rapa FPsc
Brara.F03656 2.0kb downstream 2.0kb downstream 3351 true A06: 27953834-27957184 Brassica rapa FPsc
Brara.F03656 2.0kb downstream 2.0kb downstream 2000 false A06: 27955185-27957184 Brassica rapa FPsc
Brara.F03656 5.0kb upstream 5.0kb upstream 6351 true A06: 27948834-27955184 Brassica rapa FPsc
Brara.F03656 5.0kb upstream 5.0kb upstream 5000 false A06: 27948834-27953833 Brassica rapa FPsc
Brara.F03656 5.0kb downstream 5.0kb downstream 6351 true A06: 27953834-27960184 Brassica rapa FPsc
Brara.F03656 5.0kb downstream 5.0kb downstream 5000 false A06: 27955185-27960184 Brassica rapa FPsc
Brara.F03656 10.0kb upstream 10.0kb upstream 11351 true A06: 27943834-27955184 Brassica rapa FPsc
Brara.F03656 10.0kb upstream 10.0kb upstream 10000 false A06: 27943834-27953833 Brassica rapa FPsc
Brara.F03656 10.0kb downstream 10.0kb downstream 11351 true A06: 27953834-27965184 Brassica rapa FPsc
Brara.F03656 10.0kb downstream 10.0kb downstream 10000 false A06: 27955185-27965184 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364056 5261 Brassicaceae View MSA
123835440 5264 Brassicales-Malvales View MSA
124322052 5266 SBM View MSA
124250601 5268 Malvidae View MSA
124070916 5270 Rosid View MSA
123746178 5271 Pentapetalae View MSA
122797836 5272 Eudicot View MSA
122044806 5273 Angiosperm View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier