Gene : Brara.A02160 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR22925 - GLYCOSYL HYDROLASE 43 FAMILY MEMBER Genomic Order:  2160
Name:  ? Brara.A02160 Secondary Identifier:  ? PAC:30636495
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02160 0.5kb upstream 0.5kb upstream 2783 true A01: 13425839-13428621 Brassica rapa FPsc
Brara.A02160 0.5kb upstream 0.5kb upstream 500 false A01: 13428122-13428621 Brassica rapa FPsc
Brara.A02160 0.5kb downstream 0.5kb downstream 2783 true A01: 13425339-13428121 Brassica rapa FPsc
Brara.A02160 0.5kb downstream 0.5kb downstream 500 false A01: 13425339-13425838 Brassica rapa FPsc
Brara.A02160 1.0kb upstream 1.0kb upstream 3283 true A01: 13425839-13429121 Brassica rapa FPsc
Brara.A02160 1.0kb upstream 1.0kb upstream 1000 false A01: 13428122-13429121 Brassica rapa FPsc
Brara.A02160 1.0kb downstream 1.0kb downstream 3283 true A01: 13424839-13428121 Brassica rapa FPsc
Brara.A02160 1.0kb downstream 1.0kb downstream 1000 false A01: 13424839-13425838 Brassica rapa FPsc
Brara.A02160 2.0kb upstream 2.0kb upstream 4283 true A01: 13425839-13430121 Brassica rapa FPsc
Brara.A02160 2.0kb upstream 2.0kb upstream 2000 false A01: 13428122-13430121 Brassica rapa FPsc
Brara.A02160 2.0kb downstream 2.0kb downstream 4283 true A01: 13423839-13428121 Brassica rapa FPsc
Brara.A02160 2.0kb downstream 2.0kb downstream 2000 false A01: 13423839-13425838 Brassica rapa FPsc
Brara.A02160 5.0kb upstream 5.0kb upstream 7283 true A01: 13425839-13433121 Brassica rapa FPsc
Brara.A02160 5.0kb upstream 5.0kb upstream 5000 false A01: 13428122-13433121 Brassica rapa FPsc
Brara.A02160 5.0kb downstream 5.0kb downstream 7283 true A01: 13420839-13428121 Brassica rapa FPsc
Brara.A02160 5.0kb downstream 5.0kb downstream 5000 false A01: 13420839-13425838 Brassica rapa FPsc
Brara.A02160 10.0kb upstream 10.0kb upstream 12283 true A01: 13425839-13438121 Brassica rapa FPsc
Brara.A02160 10.0kb upstream 10.0kb upstream 10000 false A01: 13428122-13438121 Brassica rapa FPsc
Brara.A02160 10.0kb downstream 10.0kb downstream 12283 true A01: 13415839-13428121 Brassica rapa FPsc
Brara.A02160 10.0kb downstream 10.0kb downstream 10000 false A01: 13415839-13425838 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041070 5273 Angiosperm View MSA
122352193 5261 Brassicaceae Singleton cluster - no MSA
123790965 5264 Brassicales-Malvales Singleton cluster - no MSA
124288894 5266 SBM Singleton cluster - no MSA
124142326 5268 Malvidae Singleton cluster - no MSA
123869234 5270 Rosid Singleton cluster - no MSA
123754816 5271 Pentapetalae View MSA
122796109 5272 Eudicot View MSA
121348927 5274 Embryophyte View MSA
123428159 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier