Gene : Brara.F03460 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR21049 - RIBOPHORIN I Genomic Order:  3460
Name:  ? Brara.F03460 Secondary Identifier:  ? PAC:30631910
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03460 0.5kb upstream 0.5kb upstream 3317 true A06: 26888162-26891478 Brassica rapa FPsc
Brara.F03460 0.5kb upstream 0.5kb upstream 500 false A06: 26888162-26888661 Brassica rapa FPsc
Brara.F03460 0.5kb downstream 0.5kb downstream 3317 true A06: 26888662-26891978 Brassica rapa FPsc
Brara.F03460 0.5kb downstream 0.5kb downstream 500 false A06: 26891479-26891978 Brassica rapa FPsc
Brara.F03460 1.0kb upstream 1.0kb upstream 3817 true A06: 26887662-26891478 Brassica rapa FPsc
Brara.F03460 1.0kb upstream 1.0kb upstream 1000 false A06: 26887662-26888661 Brassica rapa FPsc
Brara.F03460 1.0kb downstream 1.0kb downstream 3817 true A06: 26888662-26892478 Brassica rapa FPsc
Brara.F03460 1.0kb downstream 1.0kb downstream 1000 false A06: 26891479-26892478 Brassica rapa FPsc
Brara.F03460 2.0kb upstream 2.0kb upstream 4817 true A06: 26886662-26891478 Brassica rapa FPsc
Brara.F03460 2.0kb upstream 2.0kb upstream 2000 false A06: 26886662-26888661 Brassica rapa FPsc
Brara.F03460 2.0kb downstream 2.0kb downstream 4817 true A06: 26888662-26893478 Brassica rapa FPsc
Brara.F03460 2.0kb downstream 2.0kb downstream 2000 false A06: 26891479-26893478 Brassica rapa FPsc
Brara.F03460 5.0kb upstream 5.0kb upstream 7817 true A06: 26883662-26891478 Brassica rapa FPsc
Brara.F03460 5.0kb upstream 5.0kb upstream 5000 false A06: 26883662-26888661 Brassica rapa FPsc
Brara.F03460 5.0kb downstream 5.0kb downstream 7817 true A06: 26888662-26896478 Brassica rapa FPsc
Brara.F03460 5.0kb downstream 5.0kb downstream 5000 false A06: 26891479-26896478 Brassica rapa FPsc
Brara.F03460 10.0kb upstream 10.0kb upstream 12817 true A06: 26878662-26891478 Brassica rapa FPsc
Brara.F03460 10.0kb upstream 10.0kb upstream 10000 false A06: 26878662-26888661 Brassica rapa FPsc
Brara.F03460 10.0kb downstream 10.0kb downstream 12817 true A06: 26888662-26901478 Brassica rapa FPsc
Brara.F03460 10.0kb downstream 10.0kb downstream 10000 false A06: 26891479-26901478 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368155 5261 Brassicaceae View MSA
123839296 5264 Brassicales-Malvales View MSA
124338383 5266 SBM View MSA
124238095 5268 Malvidae View MSA
124062432 5270 Rosid View MSA
123739832 5271 Pentapetalae View MSA
122788147 5272 Eudicot View MSA
122045839 5273 Angiosperm View MSA
121344517 5274 Embryophyte View MSA
123425585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier