Gene : Brara.D01132 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11260:SF220 - GST-CONTAINING FLYWCH ZINC-FINGER PROTEIN Genomic Order:  1132
Name:  ? Brara.D01132 Secondary Identifier:  ? PAC:30621642
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6842 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D01132 0.5kb upstream 0.5kb upstream 2285 true A04: 10403405-10405689 Brassica rapa FPsc
Brara.D01132 0.5kb upstream 0.5kb upstream 500 false A04: 10405190-10405689 Brassica rapa FPsc
Brara.D01132 0.5kb downstream 0.5kb downstream 2285 true A04: 10402905-10405189 Brassica rapa FPsc
Brara.D01132 0.5kb downstream 0.5kb downstream 500 false A04: 10402905-10403404 Brassica rapa FPsc
Brara.D01132 1.0kb upstream 1.0kb upstream 2785 true A04: 10403405-10406189 Brassica rapa FPsc
Brara.D01132 1.0kb upstream 1.0kb upstream 1000 false A04: 10405190-10406189 Brassica rapa FPsc
Brara.D01132 1.0kb downstream 1.0kb downstream 2785 true A04: 10402405-10405189 Brassica rapa FPsc
Brara.D01132 1.0kb downstream 1.0kb downstream 1000 false A04: 10402405-10403404 Brassica rapa FPsc
Brara.D01132 2.0kb upstream 2.0kb upstream 3785 true A04: 10403405-10407189 Brassica rapa FPsc
Brara.D01132 2.0kb upstream 2.0kb upstream 2000 false A04: 10405190-10407189 Brassica rapa FPsc
Brara.D01132 2.0kb downstream 2.0kb downstream 3785 true A04: 10401405-10405189 Brassica rapa FPsc
Brara.D01132 2.0kb downstream 2.0kb downstream 2000 false A04: 10401405-10403404 Brassica rapa FPsc
Brara.D01132 5.0kb upstream 5.0kb upstream 6785 true A04: 10403405-10410189 Brassica rapa FPsc
Brara.D01132 5.0kb upstream 5.0kb upstream 5000 false A04: 10405190-10410189 Brassica rapa FPsc
Brara.D01132 5.0kb downstream 5.0kb downstream 6785 true A04: 10398405-10405189 Brassica rapa FPsc
Brara.D01132 5.0kb downstream 5.0kb downstream 5000 false A04: 10398405-10403404 Brassica rapa FPsc
Brara.D01132 10.0kb upstream 10.0kb upstream 11785 true A04: 10403405-10415189 Brassica rapa FPsc
Brara.D01132 10.0kb upstream 10.0kb upstream 10000 false A04: 10405190-10415189 Brassica rapa FPsc
Brara.D01132 10.0kb downstream 10.0kb downstream 11785 true A04: 10393405-10405189 Brassica rapa FPsc
Brara.D01132 10.0kb downstream 10.0kb downstream 10000 false A04: 10393405-10403404 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040873 5273 Angiosperm View MSA
122374727 5261 Brassicaceae View MSA
123835708 5264 Brassicales-Malvales View MSA
124339383 5266 SBM View MSA
124240290 5268 Malvidae View MSA
124063351 5270 Rosid View MSA
123751759 5271 Pentapetalae View MSA
122789366 5272 Eudicot View MSA
121350998 5274 Embryophyte View MSA
123428193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier