Gene : Brara.D01129 B. rapa FPsc v1.3
Defline:  (1 of 12) PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1129
Name:  ? Brara.D01129 Secondary Identifier:  ? PAC:30620513
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D01129 0.5kb upstream 0.5kb upstream 2363 true A04: 10361032-10363394 Brassica rapa FPsc
Brara.D01129 0.5kb upstream 0.5kb upstream 500 false A04: 10362895-10363394 Brassica rapa FPsc
Brara.D01129 0.5kb downstream 0.5kb downstream 2363 true A04: 10360532-10362894 Brassica rapa FPsc
Brara.D01129 0.5kb downstream 0.5kb downstream 500 false A04: 10360532-10361031 Brassica rapa FPsc
Brara.D01129 1.0kb upstream 1.0kb upstream 2863 true A04: 10361032-10363894 Brassica rapa FPsc
Brara.D01129 1.0kb upstream 1.0kb upstream 1000 false A04: 10362895-10363894 Brassica rapa FPsc
Brara.D01129 1.0kb downstream 1.0kb downstream 2863 true A04: 10360032-10362894 Brassica rapa FPsc
Brara.D01129 1.0kb downstream 1.0kb downstream 1000 false A04: 10360032-10361031 Brassica rapa FPsc
Brara.D01129 2.0kb upstream 2.0kb upstream 3863 true A04: 10361032-10364894 Brassica rapa FPsc
Brara.D01129 2.0kb upstream 2.0kb upstream 2000 false A04: 10362895-10364894 Brassica rapa FPsc
Brara.D01129 2.0kb downstream 2.0kb downstream 3863 true A04: 10359032-10362894 Brassica rapa FPsc
Brara.D01129 2.0kb downstream 2.0kb downstream 2000 false A04: 10359032-10361031 Brassica rapa FPsc
Brara.D01129 5.0kb upstream 5.0kb upstream 6863 true A04: 10361032-10367894 Brassica rapa FPsc
Brara.D01129 5.0kb upstream 5.0kb upstream 5000 false A04: 10362895-10367894 Brassica rapa FPsc
Brara.D01129 5.0kb downstream 5.0kb downstream 6863 true A04: 10356032-10362894 Brassica rapa FPsc
Brara.D01129 5.0kb downstream 5.0kb downstream 5000 false A04: 10356032-10361031 Brassica rapa FPsc
Brara.D01129 10.0kb upstream 10.0kb upstream 11863 true A04: 10361032-10372894 Brassica rapa FPsc
Brara.D01129 10.0kb upstream 10.0kb upstream 10000 false A04: 10362895-10372894 Brassica rapa FPsc
Brara.D01129 10.0kb downstream 10.0kb downstream 11863 true A04: 10351032-10362894 Brassica rapa FPsc
Brara.D01129 10.0kb downstream 10.0kb downstream 10000 false A04: 10351032-10361031 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373315 5261 Brassicaceae View MSA
123800530 5264 Brassicales-Malvales View MSA
124297937 5266 SBM View MSA
124149704 5268 Malvidae View MSA
123875456 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier