Gene : Brara.F03508 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR31234:SF8 - EXPRESSED PROTEIN Genomic Order:  3508
Name:  ? Brara.F03508 Secondary Identifier:  ? PAC:30630475
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03508 0.5kb upstream 0.5kb upstream 2238 true A06: 27220196-27222433 Brassica rapa FPsc
Brara.F03508 0.5kb upstream 0.5kb upstream 500 false A06: 27221934-27222433 Brassica rapa FPsc
Brara.F03508 0.5kb downstream 0.5kb downstream 2238 true A06: 27219696-27221933 Brassica rapa FPsc
Brara.F03508 0.5kb downstream 0.5kb downstream 500 false A06: 27219696-27220195 Brassica rapa FPsc
Brara.F03508 1.0kb upstream 1.0kb upstream 2738 true A06: 27220196-27222933 Brassica rapa FPsc
Brara.F03508 1.0kb upstream 1.0kb upstream 1000 false A06: 27221934-27222933 Brassica rapa FPsc
Brara.F03508 1.0kb downstream 1.0kb downstream 2738 true A06: 27219196-27221933 Brassica rapa FPsc
Brara.F03508 1.0kb downstream 1.0kb downstream 1000 false A06: 27219196-27220195 Brassica rapa FPsc
Brara.F03508 2.0kb upstream 2.0kb upstream 3738 true A06: 27220196-27223933 Brassica rapa FPsc
Brara.F03508 2.0kb upstream 2.0kb upstream 2000 false A06: 27221934-27223933 Brassica rapa FPsc
Brara.F03508 2.0kb downstream 2.0kb downstream 3738 true A06: 27218196-27221933 Brassica rapa FPsc
Brara.F03508 2.0kb downstream 2.0kb downstream 2000 false A06: 27218196-27220195 Brassica rapa FPsc
Brara.F03508 5.0kb upstream 5.0kb upstream 6738 true A06: 27220196-27226933 Brassica rapa FPsc
Brara.F03508 5.0kb upstream 5.0kb upstream 5000 false A06: 27221934-27226933 Brassica rapa FPsc
Brara.F03508 5.0kb downstream 5.0kb downstream 6738 true A06: 27215196-27221933 Brassica rapa FPsc
Brara.F03508 5.0kb downstream 5.0kb downstream 5000 false A06: 27215196-27220195 Brassica rapa FPsc
Brara.F03508 10.0kb upstream 10.0kb upstream 11738 true A06: 27220196-27231933 Brassica rapa FPsc
Brara.F03508 10.0kb upstream 10.0kb upstream 10000 false A06: 27221934-27231933 Brassica rapa FPsc
Brara.F03508 10.0kb downstream 10.0kb downstream 11738 true A06: 27210196-27221933 Brassica rapa FPsc
Brara.F03508 10.0kb downstream 10.0kb downstream 10000 false A06: 27210196-27220195 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122350716 5261 Brassicaceae Singleton cluster - no MSA
123789700 5264 Brassicales-Malvales Singleton cluster - no MSA
124287691 5266 SBM Singleton cluster - no MSA
124141338 5268 Malvidae Singleton cluster - no MSA
124067884 5270 Rosid View MSA
123745093 5271 Pentapetalae View MSA
122786322 5272 Eudicot View MSA
122042792 5273 Angiosperm View MSA
121350996 5274 Embryophyte View MSA
123381963 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier