Gene : Brara.D01001 B. rapa FPsc v1.3
Defline:  (1 of 13) PTHR11945:SF240 - AGAMOUS-LIKE MADS-BOX PROTEIN-RELATED Genomic Order:  1001
Name:  ? Brara.D01001 Secondary Identifier:  ? PAC:30621826
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D01001 0.5kb upstream 0.5kb upstream 6155 true A04: 9421291-9427445 Brassica rapa FPsc
Brara.D01001 0.5kb upstream 0.5kb upstream 500 false A04: 9421291-9421790 Brassica rapa FPsc
Brara.D01001 0.5kb downstream 0.5kb downstream 6155 true A04: 9421791-9427945 Brassica rapa FPsc
Brara.D01001 0.5kb downstream 0.5kb downstream 500 false A04: 9427446-9427945 Brassica rapa FPsc
Brara.D01001 1.0kb upstream 1.0kb upstream 6655 true A04: 9420791-9427445 Brassica rapa FPsc
Brara.D01001 1.0kb upstream 1.0kb upstream 1000 false A04: 9420791-9421790 Brassica rapa FPsc
Brara.D01001 1.0kb downstream 1.0kb downstream 6655 true A04: 9421791-9428445 Brassica rapa FPsc
Brara.D01001 1.0kb downstream 1.0kb downstream 1000 false A04: 9427446-9428445 Brassica rapa FPsc
Brara.D01001 2.0kb upstream 2.0kb upstream 7655 true A04: 9419791-9427445 Brassica rapa FPsc
Brara.D01001 2.0kb upstream 2.0kb upstream 2000 false A04: 9419791-9421790 Brassica rapa FPsc
Brara.D01001 2.0kb downstream 2.0kb downstream 7655 true A04: 9421791-9429445 Brassica rapa FPsc
Brara.D01001 2.0kb downstream 2.0kb downstream 2000 false A04: 9427446-9429445 Brassica rapa FPsc
Brara.D01001 5.0kb upstream 5.0kb upstream 10655 true A04: 9416791-9427445 Brassica rapa FPsc
Brara.D01001 5.0kb upstream 5.0kb upstream 5000 false A04: 9416791-9421790 Brassica rapa FPsc
Brara.D01001 5.0kb downstream 5.0kb downstream 10655 true A04: 9421791-9432445 Brassica rapa FPsc
Brara.D01001 5.0kb downstream 5.0kb downstream 5000 false A04: 9427446-9432445 Brassica rapa FPsc
Brara.D01001 10.0kb upstream 10.0kb upstream 15655 true A04: 9411791-9427445 Brassica rapa FPsc
Brara.D01001 10.0kb upstream 10.0kb upstream 10000 false A04: 9411791-9421790 Brassica rapa FPsc
Brara.D01001 10.0kb downstream 10.0kb downstream 15655 true A04: 9421791-9437445 Brassica rapa FPsc
Brara.D01001 10.0kb downstream 10.0kb downstream 10000 false A04: 9427446-9437445 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381350 5261 Brassicaceae View MSA
123803198 5264 Brassicales-Malvales View MSA
124300324 5266 SBM View MSA
124252728 5268 Malvidae View MSA
124074162 5270 Rosid View MSA
123746234 5271 Pentapetalae View MSA
122797377 5272 Eudicot View MSA
122048647 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier