Gene : Brara.F03348 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR15245:SF11 - PHOSPHATIDYLINOSITOL 3-KINASE-RELATED PROTEIN KINASE Genomic Order:  3348
Name:  ? Brara.F03348 Secondary Identifier:  ? PAC:30630795
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6351 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6352 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03348 0.5kb upstream 0.5kb upstream 3457 true A06: 26195525-26198981 Brassica rapa FPsc
Brara.F03348 0.5kb upstream 0.5kb upstream 500 false A06: 26198482-26198981 Brassica rapa FPsc
Brara.F03348 0.5kb downstream 0.5kb downstream 3457 true A06: 26195025-26198481 Brassica rapa FPsc
Brara.F03348 0.5kb downstream 0.5kb downstream 500 false A06: 26195025-26195524 Brassica rapa FPsc
Brara.F03348 1.0kb upstream 1.0kb upstream 3957 true A06: 26195525-26199481 Brassica rapa FPsc
Brara.F03348 1.0kb upstream 1.0kb upstream 1000 false A06: 26198482-26199481 Brassica rapa FPsc
Brara.F03348 1.0kb downstream 1.0kb downstream 3957 true A06: 26194525-26198481 Brassica rapa FPsc
Brara.F03348 1.0kb downstream 1.0kb downstream 1000 false A06: 26194525-26195524 Brassica rapa FPsc
Brara.F03348 2.0kb upstream 2.0kb upstream 4957 true A06: 26195525-26200481 Brassica rapa FPsc
Brara.F03348 2.0kb upstream 2.0kb upstream 2000 false A06: 26198482-26200481 Brassica rapa FPsc
Brara.F03348 2.0kb downstream 2.0kb downstream 4957 true A06: 26193525-26198481 Brassica rapa FPsc
Brara.F03348 2.0kb downstream 2.0kb downstream 2000 false A06: 26193525-26195524 Brassica rapa FPsc
Brara.F03348 5.0kb upstream 5.0kb upstream 7957 true A06: 26195525-26203481 Brassica rapa FPsc
Brara.F03348 5.0kb upstream 5.0kb upstream 5000 false A06: 26198482-26203481 Brassica rapa FPsc
Brara.F03348 5.0kb downstream 5.0kb downstream 7957 true A06: 26190525-26198481 Brassica rapa FPsc
Brara.F03348 5.0kb downstream 5.0kb downstream 5000 false A06: 26190525-26195524 Brassica rapa FPsc
Brara.F03348 10.0kb upstream 10.0kb upstream 12957 true A06: 26195525-26208481 Brassica rapa FPsc
Brara.F03348 10.0kb upstream 10.0kb upstream 10000 false A06: 26198482-26208481 Brassica rapa FPsc
Brara.F03348 10.0kb downstream 10.0kb downstream 12957 true A06: 26185525-26198481 Brassica rapa FPsc
Brara.F03348 10.0kb downstream 10.0kb downstream 10000 false A06: 26185525-26195524 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370992 5261 Brassicaceae View MSA
123837986 5264 Brassicales-Malvales View MSA
124342146 5266 SBM View MSA
124253244 5268 Malvidae View MSA
124068330 5270 Rosid View MSA
123741800 5271 Pentapetalae View MSA
122793394 5272 Eudicot View MSA
122050959 5273 Angiosperm View MSA
121351687 5274 Embryophyte View MSA
123427554 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier