Gene : Brara.F03350 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR10553:SF5 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM7 Genomic Order:  3350
Name:  ? Brara.F03350 Secondary Identifier:  ? PAC:30630087
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03350 0.5kb upstream 0.5kb upstream 2842 true A06: 26202576-26205417 Brassica rapa FPsc
Brara.F03350 0.5kb upstream 0.5kb upstream 500 false A06: 26204918-26205417 Brassica rapa FPsc
Brara.F03350 0.5kb downstream 0.5kb downstream 2842 true A06: 26202076-26204917 Brassica rapa FPsc
Brara.F03350 0.5kb downstream 0.5kb downstream 500 false A06: 26202076-26202575 Brassica rapa FPsc
Brara.F03350 1.0kb upstream 1.0kb upstream 3342 true A06: 26202576-26205917 Brassica rapa FPsc
Brara.F03350 1.0kb upstream 1.0kb upstream 1000 false A06: 26204918-26205917 Brassica rapa FPsc
Brara.F03350 1.0kb downstream 1.0kb downstream 3342 true A06: 26201576-26204917 Brassica rapa FPsc
Brara.F03350 1.0kb downstream 1.0kb downstream 1000 false A06: 26201576-26202575 Brassica rapa FPsc
Brara.F03350 2.0kb upstream 2.0kb upstream 4342 true A06: 26202576-26206917 Brassica rapa FPsc
Brara.F03350 2.0kb upstream 2.0kb upstream 2000 false A06: 26204918-26206917 Brassica rapa FPsc
Brara.F03350 2.0kb downstream 2.0kb downstream 4342 true A06: 26200576-26204917 Brassica rapa FPsc
Brara.F03350 2.0kb downstream 2.0kb downstream 2000 false A06: 26200576-26202575 Brassica rapa FPsc
Brara.F03350 5.0kb upstream 5.0kb upstream 7342 true A06: 26202576-26209917 Brassica rapa FPsc
Brara.F03350 5.0kb upstream 5.0kb upstream 5000 false A06: 26204918-26209917 Brassica rapa FPsc
Brara.F03350 5.0kb downstream 5.0kb downstream 7342 true A06: 26197576-26204917 Brassica rapa FPsc
Brara.F03350 5.0kb downstream 5.0kb downstream 5000 false A06: 26197576-26202575 Brassica rapa FPsc
Brara.F03350 10.0kb upstream 10.0kb upstream 12342 true A06: 26202576-26214917 Brassica rapa FPsc
Brara.F03350 10.0kb upstream 10.0kb upstream 10000 false A06: 26204918-26214917 Brassica rapa FPsc
Brara.F03350 10.0kb downstream 10.0kb downstream 12342 true A06: 26192576-26204917 Brassica rapa FPsc
Brara.F03350 10.0kb downstream 10.0kb downstream 10000 false A06: 26192576-26202575 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122350623 5261 Brassicaceae Singleton cluster - no MSA
123789622 5264 Brassicales-Malvales Singleton cluster - no MSA
124287616 5266 SBM Singleton cluster - no MSA
124141273 5268 Malvidae Singleton cluster - no MSA
123868351 5270 Rosid Singleton cluster - no MSA
123453081 5271 Pentapetalae Singleton cluster - no MSA
122488555 5272 Eudicot Singleton cluster - no MSA
122051368 5273 Angiosperm View MSA
121349484 5274 Embryophyte View MSA
123423999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier