Gene : Brara.F03410 B. rapa FPsc v1.3

Defline:  (1 of 8) PF07889 - Protein of unknown function (DUF1664) (DUF1664) Genomic Order:  3410
Name:  ? Brara.F03410 Secondary Identifier:  ? PAC:30631056

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03410 0.5kb upstream 0.5kb upstream 3017 true A06: 26554565-26557581 Brassica rapa FPsc
Brara.F03410 0.5kb upstream 0.5kb upstream 500 false A06: 26554565-26555064 Brassica rapa FPsc
Brara.F03410 0.5kb downstream 0.5kb downstream 3017 true A06: 26555065-26558081 Brassica rapa FPsc
Brara.F03410 0.5kb downstream 0.5kb downstream 500 false A06: 26557582-26558081 Brassica rapa FPsc
Brara.F03410 1.0kb upstream 1.0kb upstream 3517 true A06: 26554065-26557581 Brassica rapa FPsc
Brara.F03410 1.0kb upstream 1.0kb upstream 1000 false A06: 26554065-26555064 Brassica rapa FPsc
Brara.F03410 1.0kb downstream 1.0kb downstream 3517 true A06: 26555065-26558581 Brassica rapa FPsc
Brara.F03410 1.0kb downstream 1.0kb downstream 1000 false A06: 26557582-26558581 Brassica rapa FPsc
Brara.F03410 2.0kb upstream 2.0kb upstream 4517 true A06: 26553065-26557581 Brassica rapa FPsc
Brara.F03410 2.0kb upstream 2.0kb upstream 2000 false A06: 26553065-26555064 Brassica rapa FPsc
Brara.F03410 2.0kb downstream 2.0kb downstream 4517 true A06: 26555065-26559581 Brassica rapa FPsc
Brara.F03410 2.0kb downstream 2.0kb downstream 2000 false A06: 26557582-26559581 Brassica rapa FPsc
Brara.F03410 5.0kb upstream 5.0kb upstream 7517 true A06: 26550065-26557581 Brassica rapa FPsc
Brara.F03410 5.0kb upstream 5.0kb upstream 5000 false A06: 26550065-26555064 Brassica rapa FPsc
Brara.F03410 5.0kb downstream 5.0kb downstream 7517 true A06: 26555065-26562581 Brassica rapa FPsc
Brara.F03410 5.0kb downstream 5.0kb downstream 5000 false A06: 26557582-26562581 Brassica rapa FPsc
Brara.F03410 10.0kb upstream 10.0kb upstream 12517 true A06: 26545065-26557581 Brassica rapa FPsc
Brara.F03410 10.0kb upstream 10.0kb upstream 10000 false A06: 26545065-26555064 Brassica rapa FPsc
Brara.F03410 10.0kb downstream 10.0kb downstream 12517 true A06: 26555065-26567581 Brassica rapa FPsc
Brara.F03410 10.0kb downstream 10.0kb downstream 10000 false A06: 26557582-26567581 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371378 5261 Brassicaceae View MSA
123838361 5264 Brassicales-Malvales View MSA
124339218 5266 SBM View MSA
124245253 5268 Malvidae View MSA
124066515 5270 Rosid View MSA
123745740 5271 Pentapetalae View MSA
122789386 5272 Eudicot View MSA
122050291 5273 Angiosperm View MSA
121350785 5274 Embryophyte View MSA
123428058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier