Gene : Brara.A02072 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11048:SF18 - CHLOROPHYLL SYNTHASE, CHLOROPLASTIC Genomic Order:  2072
Name:  ? Brara.A02072 Secondary Identifier:  ? PAC:30640076
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5064 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5068 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5086 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02072 0.5kb upstream 0.5kb upstream 3155 true A01: 12560360-12563514 Brassica rapa FPsc
Brara.A02072 0.5kb upstream 0.5kb upstream 500 false A01: 12560360-12560859 Brassica rapa FPsc
Brara.A02072 0.5kb downstream 0.5kb downstream 3155 true A01: 12560860-12564014 Brassica rapa FPsc
Brara.A02072 0.5kb downstream 0.5kb downstream 500 false A01: 12563515-12564014 Brassica rapa FPsc
Brara.A02072 1.0kb upstream 1.0kb upstream 3655 true A01: 12559860-12563514 Brassica rapa FPsc
Brara.A02072 1.0kb upstream 1.0kb upstream 1000 false A01: 12559860-12560859 Brassica rapa FPsc
Brara.A02072 1.0kb downstream 1.0kb downstream 3655 true A01: 12560860-12564514 Brassica rapa FPsc
Brara.A02072 1.0kb downstream 1.0kb downstream 1000 false A01: 12563515-12564514 Brassica rapa FPsc
Brara.A02072 2.0kb upstream 2.0kb upstream 4655 true A01: 12558860-12563514 Brassica rapa FPsc
Brara.A02072 2.0kb upstream 2.0kb upstream 2000 false A01: 12558860-12560859 Brassica rapa FPsc
Brara.A02072 2.0kb downstream 2.0kb downstream 4655 true A01: 12560860-12565514 Brassica rapa FPsc
Brara.A02072 2.0kb downstream 2.0kb downstream 2000 false A01: 12563515-12565514 Brassica rapa FPsc
Brara.A02072 5.0kb upstream 5.0kb upstream 7655 true A01: 12555860-12563514 Brassica rapa FPsc
Brara.A02072 5.0kb upstream 5.0kb upstream 5000 false A01: 12555860-12560859 Brassica rapa FPsc
Brara.A02072 5.0kb downstream 5.0kb downstream 7655 true A01: 12560860-12568514 Brassica rapa FPsc
Brara.A02072 5.0kb downstream 5.0kb downstream 5000 false A01: 12563515-12568514 Brassica rapa FPsc
Brara.A02072 10.0kb upstream 10.0kb upstream 12655 true A01: 12550860-12563514 Brassica rapa FPsc
Brara.A02072 10.0kb upstream 10.0kb upstream 10000 false A01: 12550860-12560859 Brassica rapa FPsc
Brara.A02072 10.0kb downstream 10.0kb downstream 12655 true A01: 12560860-12573514 Brassica rapa FPsc
Brara.A02072 10.0kb downstream 10.0kb downstream 10000 false A01: 12563515-12573514 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366791 5261 Brassicaceae View MSA
123840816 5264 Brassicales-Malvales View MSA
124343862 5266 SBM View MSA
124242139 5268 Malvidae View MSA
124067560 5270 Rosid View MSA
123737432 5271 Pentapetalae View MSA
122786780 5272 Eudicot View MSA
122042815 5273 Angiosperm View MSA
121346314 5274 Embryophyte View MSA
123424294 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier