Gene : Brara.A02070 B. rapa FPsc v1.3
Defline:  (1 of 5) 3.1.3.66 - Phosphatidylinositol-3,4-bisphosphate 4-phosphatase / Phosphoinositide 4-phosphatase Genomic Order:  2070
Name:  ? Brara.A02070 Secondary Identifier:  ? PAC:30637248
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6368 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02070 0.5kb upstream 0.5kb upstream 3180 true A01: 12532419-12535598 Brassica rapa FPsc
Brara.A02070 0.5kb upstream 0.5kb upstream 500 false A01: 12532419-12532918 Brassica rapa FPsc
Brara.A02070 0.5kb downstream 0.5kb downstream 3180 true A01: 12532919-12536098 Brassica rapa FPsc
Brara.A02070 0.5kb downstream 0.5kb downstream 500 false A01: 12535599-12536098 Brassica rapa FPsc
Brara.A02070 1.0kb upstream 1.0kb upstream 3680 true A01: 12531919-12535598 Brassica rapa FPsc
Brara.A02070 1.0kb upstream 1.0kb upstream 1000 false A01: 12531919-12532918 Brassica rapa FPsc
Brara.A02070 1.0kb downstream 1.0kb downstream 3680 true A01: 12532919-12536598 Brassica rapa FPsc
Brara.A02070 1.0kb downstream 1.0kb downstream 1000 false A01: 12535599-12536598 Brassica rapa FPsc
Brara.A02070 2.0kb upstream 2.0kb upstream 4680 true A01: 12530919-12535598 Brassica rapa FPsc
Brara.A02070 2.0kb upstream 2.0kb upstream 2000 false A01: 12530919-12532918 Brassica rapa FPsc
Brara.A02070 2.0kb downstream 2.0kb downstream 4680 true A01: 12532919-12537598 Brassica rapa FPsc
Brara.A02070 2.0kb downstream 2.0kb downstream 2000 false A01: 12535599-12537598 Brassica rapa FPsc
Brara.A02070 5.0kb upstream 5.0kb upstream 7680 true A01: 12527919-12535598 Brassica rapa FPsc
Brara.A02070 5.0kb upstream 5.0kb upstream 5000 false A01: 12527919-12532918 Brassica rapa FPsc
Brara.A02070 5.0kb downstream 5.0kb downstream 7680 true A01: 12532919-12540598 Brassica rapa FPsc
Brara.A02070 5.0kb downstream 5.0kb downstream 5000 false A01: 12535599-12540598 Brassica rapa FPsc
Brara.A02070 10.0kb upstream 10.0kb upstream 12680 true A01: 12522919-12535598 Brassica rapa FPsc
Brara.A02070 10.0kb upstream 10.0kb upstream 10000 false A01: 12522919-12532918 Brassica rapa FPsc
Brara.A02070 10.0kb downstream 10.0kb downstream 12680 true A01: 12532919-12545598 Brassica rapa FPsc
Brara.A02070 10.0kb downstream 10.0kb downstream 10000 false A01: 12535599-12545598 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352382 5261 Brassicaceae Singleton cluster - no MSA
123791125 5264 Brassicales-Malvales Singleton cluster - no MSA
124289052 5266 SBM Singleton cluster - no MSA
124142460 5268 Malvidae Singleton cluster - no MSA
124039049 5270 Rosid View MSA
123752218 5271 Pentapetalae View MSA
122792506 5272 Eudicot View MSA
122049709 5273 Angiosperm View MSA
121351625 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier