Gene : Brara.F03086 B. rapa FPsc v1.3
Defline:  (1 of 3) 2.4.1.1 - Glycogen phosphorylase / Polyphosphorylase Genomic Order:  3086
Name:  ? Brara.F03086 Secondary Identifier:  ? PAC:30631847
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7238 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03086 0.5kb upstream 0.5kb upstream 5357 true A06: 24597135-24602491 Brassica rapa FPsc
Brara.F03086 0.5kb upstream 0.5kb upstream 500 false A06: 24601992-24602491 Brassica rapa FPsc
Brara.F03086 0.5kb downstream 0.5kb downstream 5357 true A06: 24596635-24601991 Brassica rapa FPsc
Brara.F03086 0.5kb downstream 0.5kb downstream 500 false A06: 24596635-24597134 Brassica rapa FPsc
Brara.F03086 1.0kb upstream 1.0kb upstream 5857 true A06: 24597135-24602991 Brassica rapa FPsc
Brara.F03086 1.0kb upstream 1.0kb upstream 1000 false A06: 24601992-24602991 Brassica rapa FPsc
Brara.F03086 1.0kb downstream 1.0kb downstream 5857 true A06: 24596135-24601991 Brassica rapa FPsc
Brara.F03086 1.0kb downstream 1.0kb downstream 1000 false A06: 24596135-24597134 Brassica rapa FPsc
Brara.F03086 2.0kb upstream 2.0kb upstream 6857 true A06: 24597135-24603991 Brassica rapa FPsc
Brara.F03086 2.0kb upstream 2.0kb upstream 2000 false A06: 24601992-24603991 Brassica rapa FPsc
Brara.F03086 2.0kb downstream 2.0kb downstream 6857 true A06: 24595135-24601991 Brassica rapa FPsc
Brara.F03086 2.0kb downstream 2.0kb downstream 2000 false A06: 24595135-24597134 Brassica rapa FPsc
Brara.F03086 5.0kb upstream 5.0kb upstream 9857 true A06: 24597135-24606991 Brassica rapa FPsc
Brara.F03086 5.0kb upstream 5.0kb upstream 5000 false A06: 24601992-24606991 Brassica rapa FPsc
Brara.F03086 5.0kb downstream 5.0kb downstream 9857 true A06: 24592135-24601991 Brassica rapa FPsc
Brara.F03086 5.0kb downstream 5.0kb downstream 5000 false A06: 24592135-24597134 Brassica rapa FPsc
Brara.F03086 10.0kb upstream 10.0kb upstream 14857 true A06: 24597135-24611991 Brassica rapa FPsc
Brara.F03086 10.0kb upstream 10.0kb upstream 10000 false A06: 24601992-24611991 Brassica rapa FPsc
Brara.F03086 10.0kb downstream 10.0kb downstream 14857 true A06: 24587135-24601991 Brassica rapa FPsc
Brara.F03086 10.0kb downstream 10.0kb downstream 10000 false A06: 24587135-24597134 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370599 5261 Brassicaceae View MSA
123834148 5264 Brassicales-Malvales View MSA
124350391 5266 SBM View MSA
124253620 5268 Malvidae View MSA
124071447 5270 Rosid View MSA
123744201 5271 Pentapetalae View MSA
122788131 5272 Eudicot View MSA
122045780 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier