Gene : Brara.F03122 B. rapa FPsc v1.3
Defline:  (1 of 1) PF03531 - Structure-specific recognition protein (SSRP1) (SSrecog) Genomic Order:  3122
Name:  ? Brara.F03122 Secondary Identifier:  ? PAC:30631052
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03122 0.5kb upstream 0.5kb upstream 2771 true A06: 24804515-24807285 Brassica rapa FPsc
Brara.F03122 0.5kb upstream 0.5kb upstream 500 false A06: 24804515-24805014 Brassica rapa FPsc
Brara.F03122 0.5kb downstream 0.5kb downstream 2771 true A06: 24805015-24807785 Brassica rapa FPsc
Brara.F03122 0.5kb downstream 0.5kb downstream 500 false A06: 24807286-24807785 Brassica rapa FPsc
Brara.F03122 1.0kb upstream 1.0kb upstream 3271 true A06: 24804015-24807285 Brassica rapa FPsc
Brara.F03122 1.0kb upstream 1.0kb upstream 1000 false A06: 24804015-24805014 Brassica rapa FPsc
Brara.F03122 1.0kb downstream 1.0kb downstream 3271 true A06: 24805015-24808285 Brassica rapa FPsc
Brara.F03122 1.0kb downstream 1.0kb downstream 1000 false A06: 24807286-24808285 Brassica rapa FPsc
Brara.F03122 2.0kb upstream 2.0kb upstream 4271 true A06: 24803015-24807285 Brassica rapa FPsc
Brara.F03122 2.0kb upstream 2.0kb upstream 2000 false A06: 24803015-24805014 Brassica rapa FPsc
Brara.F03122 2.0kb downstream 2.0kb downstream 4271 true A06: 24805015-24809285 Brassica rapa FPsc
Brara.F03122 2.0kb downstream 2.0kb downstream 2000 false A06: 24807286-24809285 Brassica rapa FPsc
Brara.F03122 5.0kb upstream 5.0kb upstream 7271 true A06: 24800015-24807285 Brassica rapa FPsc
Brara.F03122 5.0kb upstream 5.0kb upstream 5000 false A06: 24800015-24805014 Brassica rapa FPsc
Brara.F03122 5.0kb downstream 5.0kb downstream 7271 true A06: 24805015-24812285 Brassica rapa FPsc
Brara.F03122 5.0kb downstream 5.0kb downstream 5000 false A06: 24807286-24812285 Brassica rapa FPsc
Brara.F03122 10.0kb upstream 10.0kb upstream 12271 true A06: 24795015-24807285 Brassica rapa FPsc
Brara.F03122 10.0kb upstream 10.0kb upstream 10000 false A06: 24795015-24805014 Brassica rapa FPsc
Brara.F03122 10.0kb downstream 10.0kb downstream 12271 true A06: 24805015-24817285 Brassica rapa FPsc
Brara.F03122 10.0kb downstream 10.0kb downstream 10000 false A06: 24807286-24817285 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122350842 5261 Brassicaceae Singleton cluster - no MSA
123789807 5264 Brassicales-Malvales Singleton cluster - no MSA
124287790 5266 SBM Singleton cluster - no MSA
124141421 5268 Malvidae Singleton cluster - no MSA
123868482 5270 Rosid Singleton cluster - no MSA
123744635 5271 Pentapetalae View MSA
122790158 5272 Eudicot View MSA
122041570 5273 Angiosperm View MSA
121347609 5274 Embryophyte View MSA
123424150 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

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