Gene : Brara.A01896 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR23315:SF129 - ARMADILLO/BETA-CATENIN-LIKE REPEAT-CONTAINING PROTEIN Genomic Order:  1896
Name:  ? Brara.A01896 Secondary Identifier:  ? PAC:30637383
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01896 0.5kb upstream 0.5kb upstream 2492 true A01: 10878594-10881085 Brassica rapa FPsc
Brara.A01896 0.5kb upstream 0.5kb upstream 500 false A01: 10878594-10879093 Brassica rapa FPsc
Brara.A01896 0.5kb downstream 0.5kb downstream 2492 true A01: 10879094-10881585 Brassica rapa FPsc
Brara.A01896 0.5kb downstream 0.5kb downstream 500 false A01: 10881086-10881585 Brassica rapa FPsc
Brara.A01896 1.0kb upstream 1.0kb upstream 2992 true A01: 10878094-10881085 Brassica rapa FPsc
Brara.A01896 1.0kb upstream 1.0kb upstream 1000 false A01: 10878094-10879093 Brassica rapa FPsc
Brara.A01896 1.0kb downstream 1.0kb downstream 2992 true A01: 10879094-10882085 Brassica rapa FPsc
Brara.A01896 1.0kb downstream 1.0kb downstream 1000 false A01: 10881086-10882085 Brassica rapa FPsc
Brara.A01896 2.0kb upstream 2.0kb upstream 3992 true A01: 10877094-10881085 Brassica rapa FPsc
Brara.A01896 2.0kb upstream 2.0kb upstream 2000 false A01: 10877094-10879093 Brassica rapa FPsc
Brara.A01896 2.0kb downstream 2.0kb downstream 3992 true A01: 10879094-10883085 Brassica rapa FPsc
Brara.A01896 2.0kb downstream 2.0kb downstream 2000 false A01: 10881086-10883085 Brassica rapa FPsc
Brara.A01896 5.0kb upstream 5.0kb upstream 6992 true A01: 10874094-10881085 Brassica rapa FPsc
Brara.A01896 5.0kb upstream 5.0kb upstream 5000 false A01: 10874094-10879093 Brassica rapa FPsc
Brara.A01896 5.0kb downstream 5.0kb downstream 6992 true A01: 10879094-10886085 Brassica rapa FPsc
Brara.A01896 5.0kb downstream 5.0kb downstream 5000 false A01: 10881086-10886085 Brassica rapa FPsc
Brara.A01896 10.0kb upstream 10.0kb upstream 11992 true A01: 10869094-10881085 Brassica rapa FPsc
Brara.A01896 10.0kb upstream 10.0kb upstream 10000 false A01: 10869094-10879093 Brassica rapa FPsc
Brara.A01896 10.0kb downstream 10.0kb downstream 11992 true A01: 10879094-10891085 Brassica rapa FPsc
Brara.A01896 10.0kb downstream 10.0kb downstream 10000 false A01: 10881086-10891085 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363455 5261 Brassicaceae View MSA
123830839 5264 Brassicales-Malvales View MSA
124336587 5266 SBM View MSA
124239791 5268 Malvidae View MSA
124065443 5270 Rosid View MSA
123751031 5271 Pentapetalae View MSA
122790381 5272 Eudicot View MSA
122043929 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier