Gene : Brara.F03135 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11028 - VACUOLAR ATP SYNTHASE SUBUNIT AC39 Genomic Order:  3135
Name:  ? Brara.F03135 Secondary Identifier:  ? PAC:30630101
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03135 0.5kb upstream 0.5kb upstream 2968 true A06: 24885404-24888371 Brassica rapa FPsc
Brara.F03135 0.5kb upstream 0.5kb upstream 500 false A06: 24887872-24888371 Brassica rapa FPsc
Brara.F03135 0.5kb downstream 0.5kb downstream 2968 true A06: 24884904-24887871 Brassica rapa FPsc
Brara.F03135 0.5kb downstream 0.5kb downstream 500 false A06: 24884904-24885403 Brassica rapa FPsc
Brara.F03135 1.0kb upstream 1.0kb upstream 3468 true A06: 24885404-24888871 Brassica rapa FPsc
Brara.F03135 1.0kb upstream 1.0kb upstream 1000 false A06: 24887872-24888871 Brassica rapa FPsc
Brara.F03135 1.0kb downstream 1.0kb downstream 3468 true A06: 24884404-24887871 Brassica rapa FPsc
Brara.F03135 1.0kb downstream 1.0kb downstream 1000 false A06: 24884404-24885403 Brassica rapa FPsc
Brara.F03135 2.0kb upstream 2.0kb upstream 4468 true A06: 24885404-24889871 Brassica rapa FPsc
Brara.F03135 2.0kb upstream 2.0kb upstream 2000 false A06: 24887872-24889871 Brassica rapa FPsc
Brara.F03135 2.0kb downstream 2.0kb downstream 4468 true A06: 24883404-24887871 Brassica rapa FPsc
Brara.F03135 2.0kb downstream 2.0kb downstream 2000 false A06: 24883404-24885403 Brassica rapa FPsc
Brara.F03135 5.0kb upstream 5.0kb upstream 7468 true A06: 24885404-24892871 Brassica rapa FPsc
Brara.F03135 5.0kb upstream 5.0kb upstream 5000 false A06: 24887872-24892871 Brassica rapa FPsc
Brara.F03135 5.0kb downstream 5.0kb downstream 7468 true A06: 24880404-24887871 Brassica rapa FPsc
Brara.F03135 5.0kb downstream 5.0kb downstream 5000 false A06: 24880404-24885403 Brassica rapa FPsc
Brara.F03135 10.0kb upstream 10.0kb upstream 12468 true A06: 24885404-24897871 Brassica rapa FPsc
Brara.F03135 10.0kb upstream 10.0kb upstream 10000 false A06: 24887872-24897871 Brassica rapa FPsc
Brara.F03135 10.0kb downstream 10.0kb downstream 12468 true A06: 24875404-24887871 Brassica rapa FPsc
Brara.F03135 10.0kb downstream 10.0kb downstream 10000 false A06: 24875404-24885403 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121505638 5273 Angiosperm Singleton cluster - no MSA
122350630 5261 Brassicaceae Singleton cluster - no MSA
123789628 5264 Brassicales-Malvales Singleton cluster - no MSA
124287621 5266 SBM Singleton cluster - no MSA
124141277 5268 Malvidae Singleton cluster - no MSA
123868354 5270 Rosid Singleton cluster - no MSA
123453084 5271 Pentapetalae Singleton cluster - no MSA
122488558 5272 Eudicot Singleton cluster - no MSA
120778843 5274 Embryophyte Singleton cluster - no MSA
123427776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier