Gene : Brara.F03190 B. rapa FPsc v1.3

Defline:  (1 of 3) PTHR22852 - LETHAL 2 DENTICLELESS PROTEIN RETINOIC ACID-REGULATED NUCLEAR MATRIX-ASSOCIATED PROTEIN Genomic Order:  3190
Name:  ? Brara.F03190 Secondary Identifier:  ? PAC:30630226

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03190 0.5kb upstream 0.5kb upstream 3667 true A06: 25180274-25183940 Brassica rapa FPsc
Brara.F03190 0.5kb upstream 0.5kb upstream 500 false A06: 25183441-25183940 Brassica rapa FPsc
Brara.F03190 0.5kb downstream 0.5kb downstream 3667 true A06: 25179774-25183440 Brassica rapa FPsc
Brara.F03190 0.5kb downstream 0.5kb downstream 500 false A06: 25179774-25180273 Brassica rapa FPsc
Brara.F03190 1.0kb upstream 1.0kb upstream 4167 true A06: 25180274-25184440 Brassica rapa FPsc
Brara.F03190 1.0kb upstream 1.0kb upstream 1000 false A06: 25183441-25184440 Brassica rapa FPsc
Brara.F03190 1.0kb downstream 1.0kb downstream 4167 true A06: 25179274-25183440 Brassica rapa FPsc
Brara.F03190 1.0kb downstream 1.0kb downstream 1000 false A06: 25179274-25180273 Brassica rapa FPsc
Brara.F03190 2.0kb upstream 2.0kb upstream 5167 true A06: 25180274-25185440 Brassica rapa FPsc
Brara.F03190 2.0kb upstream 2.0kb upstream 2000 false A06: 25183441-25185440 Brassica rapa FPsc
Brara.F03190 2.0kb downstream 2.0kb downstream 5167 true A06: 25178274-25183440 Brassica rapa FPsc
Brara.F03190 2.0kb downstream 2.0kb downstream 2000 false A06: 25178274-25180273 Brassica rapa FPsc
Brara.F03190 5.0kb upstream 5.0kb upstream 8167 true A06: 25180274-25188440 Brassica rapa FPsc
Brara.F03190 5.0kb upstream 5.0kb upstream 5000 false A06: 25183441-25188440 Brassica rapa FPsc
Brara.F03190 5.0kb downstream 5.0kb downstream 8167 true A06: 25175274-25183440 Brassica rapa FPsc
Brara.F03190 5.0kb downstream 5.0kb downstream 5000 false A06: 25175274-25180273 Brassica rapa FPsc
Brara.F03190 10.0kb upstream 10.0kb upstream 13167 true A06: 25180274-25193440 Brassica rapa FPsc
Brara.F03190 10.0kb upstream 10.0kb upstream 10000 false A06: 25183441-25193440 Brassica rapa FPsc
Brara.F03190 10.0kb downstream 10.0kb downstream 13167 true A06: 25170274-25183440 Brassica rapa FPsc
Brara.F03190 10.0kb downstream 10.0kb downstream 10000 false A06: 25170274-25180273 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041110 5273 Angiosperm View MSA
122377775 5261 Brassicaceae View MSA
123836093 5264 Brassicales-Malvales View MSA
124344864 5266 SBM View MSA
124237027 5268 Malvidae View MSA
124066705 5270 Rosid View MSA
123738677 5271 Pentapetalae View MSA
122787959 5272 Eudicot View MSA
121344109 5274 Embryophyte View MSA
123428561 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier