Gene : Brara.F03057 B. rapa FPsc v1.3
Defline:  (1 of 3) 5.4.2.12 - Phosphoglycerate mutase (2,3-diphosphoglycerate-independent) / Phosphoglyceromutase Genomic Order:  3057
Name:  ? Brara.F03057 Secondary Identifier:  ? PAC:30629763
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLUCONEO-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-1042 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5723 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03057 0.5kb upstream 0.5kb upstream 3366 true A06: 24357740-24361105 Brassica rapa FPsc
Brara.F03057 0.5kb upstream 0.5kb upstream 500 false A06: 24360606-24361105 Brassica rapa FPsc
Brara.F03057 0.5kb downstream 0.5kb downstream 3366 true A06: 24357240-24360605 Brassica rapa FPsc
Brara.F03057 0.5kb downstream 0.5kb downstream 500 false A06: 24357240-24357739 Brassica rapa FPsc
Brara.F03057 1.0kb upstream 1.0kb upstream 3866 true A06: 24357740-24361605 Brassica rapa FPsc
Brara.F03057 1.0kb upstream 1.0kb upstream 1000 false A06: 24360606-24361605 Brassica rapa FPsc
Brara.F03057 1.0kb downstream 1.0kb downstream 3866 true A06: 24356740-24360605 Brassica rapa FPsc
Brara.F03057 1.0kb downstream 1.0kb downstream 1000 false A06: 24356740-24357739 Brassica rapa FPsc
Brara.F03057 2.0kb upstream 2.0kb upstream 4866 true A06: 24357740-24362605 Brassica rapa FPsc
Brara.F03057 2.0kb upstream 2.0kb upstream 2000 false A06: 24360606-24362605 Brassica rapa FPsc
Brara.F03057 2.0kb downstream 2.0kb downstream 4866 true A06: 24355740-24360605 Brassica rapa FPsc
Brara.F03057 2.0kb downstream 2.0kb downstream 2000 false A06: 24355740-24357739 Brassica rapa FPsc
Brara.F03057 5.0kb upstream 5.0kb upstream 7866 true A06: 24357740-24365605 Brassica rapa FPsc
Brara.F03057 5.0kb upstream 5.0kb upstream 5000 false A06: 24360606-24365605 Brassica rapa FPsc
Brara.F03057 5.0kb downstream 5.0kb downstream 7866 true A06: 24352740-24360605 Brassica rapa FPsc
Brara.F03057 5.0kb downstream 5.0kb downstream 5000 false A06: 24352740-24357739 Brassica rapa FPsc
Brara.F03057 10.0kb upstream 10.0kb upstream 12866 true A06: 24357740-24370605 Brassica rapa FPsc
Brara.F03057 10.0kb upstream 10.0kb upstream 10000 false A06: 24360606-24370605 Brassica rapa FPsc
Brara.F03057 10.0kb downstream 10.0kb downstream 12866 true A06: 24347740-24360605 Brassica rapa FPsc
Brara.F03057 10.0kb downstream 10.0kb downstream 10000 false A06: 24347740-24357739 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122350564 5261 Brassicaceae Singleton cluster - no MSA
123842425 5264 Brassicales-Malvales View MSA
124323481 5266 SBM View MSA
124169489 5268 Malvidae View MSA
124068115 5270 Rosid View MSA
123752475 5271 Pentapetalae View MSA
122786354 5272 Eudicot View MSA
122046055 5273 Angiosperm View MSA
121343817 5274 Embryophyte View MSA
123428865 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier