Gene : Brara.F02954 B. rapa FPsc v1.3
Defline:  (1 of 4) 6.1.1.5 - Isoleucine--tRNA ligase / Isoleucyl-tRNA synthetase Genomic Order:  2954
Name:  ? Brara.F02954 Secondary Identifier:  ? PAC:30628320
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc TRNA-CHARGING-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F02954 0.5kb upstream 0.5kb upstream 7817 true A06: 23877539-23885355 Brassica rapa FPsc
Brara.F02954 0.5kb upstream 0.5kb upstream 500 false A06: 23877539-23878038 Brassica rapa FPsc
Brara.F02954 0.5kb downstream 0.5kb downstream 7817 true A06: 23878039-23885855 Brassica rapa FPsc
Brara.F02954 0.5kb downstream 0.5kb downstream 500 false A06: 23885356-23885855 Brassica rapa FPsc
Brara.F02954 1.0kb upstream 1.0kb upstream 8317 true A06: 23877039-23885355 Brassica rapa FPsc
Brara.F02954 1.0kb upstream 1.0kb upstream 1000 false A06: 23877039-23878038 Brassica rapa FPsc
Brara.F02954 1.0kb downstream 1.0kb downstream 8317 true A06: 23878039-23886355 Brassica rapa FPsc
Brara.F02954 1.0kb downstream 1.0kb downstream 1000 false A06: 23885356-23886355 Brassica rapa FPsc
Brara.F02954 2.0kb upstream 2.0kb upstream 9317 true A06: 23876039-23885355 Brassica rapa FPsc
Brara.F02954 2.0kb upstream 2.0kb upstream 2000 false A06: 23876039-23878038 Brassica rapa FPsc
Brara.F02954 2.0kb downstream 2.0kb downstream 9317 true A06: 23878039-23887355 Brassica rapa FPsc
Brara.F02954 2.0kb downstream 2.0kb downstream 2000 false A06: 23885356-23887355 Brassica rapa FPsc
Brara.F02954 5.0kb upstream 5.0kb upstream 12317 true A06: 23873039-23885355 Brassica rapa FPsc
Brara.F02954 5.0kb upstream 5.0kb upstream 5000 false A06: 23873039-23878038 Brassica rapa FPsc
Brara.F02954 5.0kb downstream 5.0kb downstream 12317 true A06: 23878039-23890355 Brassica rapa FPsc
Brara.F02954 5.0kb downstream 5.0kb downstream 5000 false A06: 23885356-23890355 Brassica rapa FPsc
Brara.F02954 10.0kb upstream 10.0kb upstream 17317 true A06: 23868039-23885355 Brassica rapa FPsc
Brara.F02954 10.0kb upstream 10.0kb upstream 10000 false A06: 23868039-23878038 Brassica rapa FPsc
Brara.F02954 10.0kb downstream 10.0kb downstream 17317 true A06: 23878039-23895355 Brassica rapa FPsc
Brara.F02954 10.0kb downstream 10.0kb downstream 10000 false A06: 23885356-23895355 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360799 5261 Brassicaceae View MSA
123829224 5264 Brassicales-Malvales View MSA
124344420 5266 SBM View MSA
124243360 5268 Malvidae View MSA
124064635 5270 Rosid View MSA
123740769 5271 Pentapetalae View MSA
122790755 5272 Eudicot View MSA
122042566 5273 Angiosperm View MSA
121346634 5274 Embryophyte View MSA
123424788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier