Gene : Brara.A01861 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR11062:SF59 - EXOSTOSIN FAMILY PROTEIN Genomic Order:  1861
Name:  ? Brara.A01861 Secondary Identifier:  ? PAC:30637080
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5980 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01861 0.5kb upstream 0.5kb upstream 2977 true A01: 10639700-10642676 Brassica rapa FPsc
Brara.A01861 0.5kb upstream 0.5kb upstream 500 false A01: 10642177-10642676 Brassica rapa FPsc
Brara.A01861 0.5kb downstream 0.5kb downstream 2977 true A01: 10639200-10642176 Brassica rapa FPsc
Brara.A01861 0.5kb downstream 0.5kb downstream 500 false A01: 10639200-10639699 Brassica rapa FPsc
Brara.A01861 1.0kb upstream 1.0kb upstream 3477 true A01: 10639700-10643176 Brassica rapa FPsc
Brara.A01861 1.0kb upstream 1.0kb upstream 1000 false A01: 10642177-10643176 Brassica rapa FPsc
Brara.A01861 1.0kb downstream 1.0kb downstream 3477 true A01: 10638700-10642176 Brassica rapa FPsc
Brara.A01861 1.0kb downstream 1.0kb downstream 1000 false A01: 10638700-10639699 Brassica rapa FPsc
Brara.A01861 2.0kb upstream 2.0kb upstream 4477 true A01: 10639700-10644176 Brassica rapa FPsc
Brara.A01861 2.0kb upstream 2.0kb upstream 2000 false A01: 10642177-10644176 Brassica rapa FPsc
Brara.A01861 2.0kb downstream 2.0kb downstream 4477 true A01: 10637700-10642176 Brassica rapa FPsc
Brara.A01861 2.0kb downstream 2.0kb downstream 2000 false A01: 10637700-10639699 Brassica rapa FPsc
Brara.A01861 5.0kb upstream 5.0kb upstream 7477 true A01: 10639700-10647176 Brassica rapa FPsc
Brara.A01861 5.0kb upstream 5.0kb upstream 5000 false A01: 10642177-10647176 Brassica rapa FPsc
Brara.A01861 5.0kb downstream 5.0kb downstream 7477 true A01: 10634700-10642176 Brassica rapa FPsc
Brara.A01861 5.0kb downstream 5.0kb downstream 5000 false A01: 10634700-10639699 Brassica rapa FPsc
Brara.A01861 10.0kb upstream 10.0kb upstream 12477 true A01: 10639700-10652176 Brassica rapa FPsc
Brara.A01861 10.0kb upstream 10.0kb upstream 10000 false A01: 10642177-10652176 Brassica rapa FPsc
Brara.A01861 10.0kb downstream 10.0kb downstream 12477 true A01: 10629700-10642176 Brassica rapa FPsc
Brara.A01861 10.0kb downstream 10.0kb downstream 10000 false A01: 10629700-10639699 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374619 5261 Brassicaceae View MSA
123829606 5264 Brassicales-Malvales View MSA
124346076 5266 SBM View MSA
124243747 5268 Malvidae View MSA
124063167 5270 Rosid View MSA
123741138 5271 Pentapetalae View MSA
122789943 5272 Eudicot View MSA
122046187 5273 Angiosperm View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier