Gene : Brara.D00890 B. rapa FPsc v1.3
Defline:  (1 of 4) PF00069//PF13947//PF14380 - Protein kinase domain (Pkinase) // Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) // Wall-associated receptor kinase C-terminal (WAK_assoc) Genomic Order:  890
Name:  ? Brara.D00890 Secondary Identifier:  ? PAC:30622228
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7409 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00890 0.5kb upstream 0.5kb upstream 2694 true A04: 8349541-8352234 Brassica rapa FPsc
Brara.D00890 0.5kb upstream 0.5kb upstream 500 false A04: 8351735-8352234 Brassica rapa FPsc
Brara.D00890 0.5kb downstream 0.5kb downstream 2694 true A04: 8349041-8351734 Brassica rapa FPsc
Brara.D00890 0.5kb downstream 0.5kb downstream 500 false A04: 8349041-8349540 Brassica rapa FPsc
Brara.D00890 1.0kb upstream 1.0kb upstream 3194 true A04: 8349541-8352734 Brassica rapa FPsc
Brara.D00890 1.0kb upstream 1.0kb upstream 1000 false A04: 8351735-8352734 Brassica rapa FPsc
Brara.D00890 1.0kb downstream 1.0kb downstream 3194 true A04: 8348541-8351734 Brassica rapa FPsc
Brara.D00890 1.0kb downstream 1.0kb downstream 1000 false A04: 8348541-8349540 Brassica rapa FPsc
Brara.D00890 2.0kb upstream 2.0kb upstream 4194 true A04: 8349541-8353734 Brassica rapa FPsc
Brara.D00890 2.0kb upstream 2.0kb upstream 2000 false A04: 8351735-8353734 Brassica rapa FPsc
Brara.D00890 2.0kb downstream 2.0kb downstream 4194 true A04: 8347541-8351734 Brassica rapa FPsc
Brara.D00890 2.0kb downstream 2.0kb downstream 2000 false A04: 8347541-8349540 Brassica rapa FPsc
Brara.D00890 5.0kb upstream 5.0kb upstream 7194 true A04: 8349541-8356734 Brassica rapa FPsc
Brara.D00890 5.0kb upstream 5.0kb upstream 5000 false A04: 8351735-8356734 Brassica rapa FPsc
Brara.D00890 5.0kb downstream 5.0kb downstream 7194 true A04: 8344541-8351734 Brassica rapa FPsc
Brara.D00890 5.0kb downstream 5.0kb downstream 5000 false A04: 8344541-8349540 Brassica rapa FPsc
Brara.D00890 10.0kb upstream 10.0kb upstream 12194 true A04: 8349541-8361734 Brassica rapa FPsc
Brara.D00890 10.0kb upstream 10.0kb upstream 10000 false A04: 8351735-8361734 Brassica rapa FPsc
Brara.D00890 10.0kb downstream 10.0kb downstream 12194 true A04: 8339541-8351734 Brassica rapa FPsc
Brara.D00890 10.0kb downstream 10.0kb downstream 10000 false A04: 8339541-8349540 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378696 5261 Brassicaceae View MSA
123841678 5264 Brassicales-Malvales View MSA
124350842 5266 SBM View MSA
124254633 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier