Gene : Brara.G00452 B. rapa FPsc v1.3
Defline:  (1 of 1) 5.3.1.23 - S-methyl-5-thioribose-1-phosphate isomerase / S-methyl-5-thio-D-ribose-1-phosphate aldose-ketose-isomerase Genomic Order:  452
Name:  ? Brara.G00452 Secondary Identifier:  ? PAC:30632462
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-4361 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7270 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7528 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G00452 0.5kb upstream 0.5kb upstream 3013 true A07: 5509076-5512088 Brassica rapa FPsc
Brara.G00452 0.5kb upstream 0.5kb upstream 500 false A07: 5509076-5509575 Brassica rapa FPsc
Brara.G00452 0.5kb downstream 0.5kb downstream 3013 true A07: 5509576-5512588 Brassica rapa FPsc
Brara.G00452 0.5kb downstream 0.5kb downstream 500 false A07: 5512089-5512588 Brassica rapa FPsc
Brara.G00452 1.0kb upstream 1.0kb upstream 3513 true A07: 5508576-5512088 Brassica rapa FPsc
Brara.G00452 1.0kb upstream 1.0kb upstream 1000 false A07: 5508576-5509575 Brassica rapa FPsc
Brara.G00452 1.0kb downstream 1.0kb downstream 3513 true A07: 5509576-5513088 Brassica rapa FPsc
Brara.G00452 1.0kb downstream 1.0kb downstream 1000 false A07: 5512089-5513088 Brassica rapa FPsc
Brara.G00452 2.0kb upstream 2.0kb upstream 4513 true A07: 5507576-5512088 Brassica rapa FPsc
Brara.G00452 2.0kb upstream 2.0kb upstream 2000 false A07: 5507576-5509575 Brassica rapa FPsc
Brara.G00452 2.0kb downstream 2.0kb downstream 4513 true A07: 5509576-5514088 Brassica rapa FPsc
Brara.G00452 2.0kb downstream 2.0kb downstream 2000 false A07: 5512089-5514088 Brassica rapa FPsc
Brara.G00452 5.0kb upstream 5.0kb upstream 7513 true A07: 5504576-5512088 Brassica rapa FPsc
Brara.G00452 5.0kb upstream 5.0kb upstream 5000 false A07: 5504576-5509575 Brassica rapa FPsc
Brara.G00452 5.0kb downstream 5.0kb downstream 7513 true A07: 5509576-5517088 Brassica rapa FPsc
Brara.G00452 5.0kb downstream 5.0kb downstream 5000 false A07: 5512089-5517088 Brassica rapa FPsc
Brara.G00452 10.0kb upstream 10.0kb upstream 12513 true A07: 5499576-5512088 Brassica rapa FPsc
Brara.G00452 10.0kb upstream 10.0kb upstream 10000 false A07: 5499576-5509575 Brassica rapa FPsc
Brara.G00452 10.0kb downstream 10.0kb downstream 12513 true A07: 5509576-5522088 Brassica rapa FPsc
Brara.G00452 10.0kb downstream 10.0kb downstream 10000 false A07: 5512089-5522088 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360311 5261 Brassicaceae View MSA
123829438 5264 Brassicales-Malvales View MSA
124345905 5266 SBM View MSA
124238790 5268 Malvidae View MSA
124060423 5270 Rosid View MSA
123740094 5271 Pentapetalae View MSA
122788864 5272 Eudicot View MSA
122043863 5273 Angiosperm View MSA
121310201 5274 Embryophyte View MSA
123428305 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier