Gene : Brara.A02419 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Genomic Order:  2419
Name:  ? Brara.A02419 Secondary Identifier:  ? PAC:30636136
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02419 0.5kb upstream 0.5kb upstream 3203 true A01: 19122575-19125777 Brassica rapa FPsc
Brara.A02419 0.5kb upstream 0.5kb upstream 500 false A01: 19125278-19125777 Brassica rapa FPsc
Brara.A02419 0.5kb downstream 0.5kb downstream 3203 true A01: 19122075-19125277 Brassica rapa FPsc
Brara.A02419 0.5kb downstream 0.5kb downstream 500 false A01: 19122075-19122574 Brassica rapa FPsc
Brara.A02419 1.0kb upstream 1.0kb upstream 3703 true A01: 19122575-19126277 Brassica rapa FPsc
Brara.A02419 1.0kb upstream 1.0kb upstream 1000 false A01: 19125278-19126277 Brassica rapa FPsc
Brara.A02419 1.0kb downstream 1.0kb downstream 3703 true A01: 19121575-19125277 Brassica rapa FPsc
Brara.A02419 1.0kb downstream 1.0kb downstream 1000 false A01: 19121575-19122574 Brassica rapa FPsc
Brara.A02419 2.0kb upstream 2.0kb upstream 4703 true A01: 19122575-19127277 Brassica rapa FPsc
Brara.A02419 2.0kb upstream 2.0kb upstream 2000 false A01: 19125278-19127277 Brassica rapa FPsc
Brara.A02419 2.0kb downstream 2.0kb downstream 4703 true A01: 19120575-19125277 Brassica rapa FPsc
Brara.A02419 2.0kb downstream 2.0kb downstream 2000 false A01: 19120575-19122574 Brassica rapa FPsc
Brara.A02419 5.0kb upstream 5.0kb upstream 7703 true A01: 19122575-19130277 Brassica rapa FPsc
Brara.A02419 5.0kb upstream 5.0kb upstream 5000 false A01: 19125278-19130277 Brassica rapa FPsc
Brara.A02419 5.0kb downstream 5.0kb downstream 7703 true A01: 19117575-19125277 Brassica rapa FPsc
Brara.A02419 5.0kb downstream 5.0kb downstream 5000 false A01: 19117575-19122574 Brassica rapa FPsc
Brara.A02419 10.0kb upstream 10.0kb upstream 12703 true A01: 19122575-19135277 Brassica rapa FPsc
Brara.A02419 10.0kb upstream 10.0kb upstream 10000 false A01: 19125278-19135277 Brassica rapa FPsc
Brara.A02419 10.0kb downstream 10.0kb downstream 12703 true A01: 19112575-19125277 Brassica rapa FPsc
Brara.A02419 10.0kb downstream 10.0kb downstream 10000 false A01: 19112575-19122574 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027848 5273 Angiosperm View MSA
124063850 5270 Rosid View MSA
122365315 5261 Brassicaceae View MSA
123827412 5264 Brassicales-Malvales View MSA
124342810 5266 SBM View MSA
124240381 5268 Malvidae View MSA
123736546 5271 Pentapetalae View MSA
122787346 5272 Eudicot View MSA
121349135 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier