Gene : Brara.A02454 B. rapa FPsc v1.3
Defline:  (1 of 12) PF13952 - Domain of unknown function (DUF4216) (DUF4216) Genomic Order:  2454
Name:  ? Brara.A02454 Secondary Identifier:  ? PAC:30637556
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02454 0.5kb upstream 0.5kb upstream 1058 true A01: 19696200-19697257 Brassica rapa FPsc
Brara.A02454 0.5kb upstream 0.5kb upstream 500 false A01: 19696758-19697257 Brassica rapa FPsc
Brara.A02454 0.5kb downstream 0.5kb downstream 1058 true A01: 19695700-19696757 Brassica rapa FPsc
Brara.A02454 0.5kb downstream 0.5kb downstream 500 false A01: 19695700-19696199 Brassica rapa FPsc
Brara.A02454 1.0kb upstream 1.0kb upstream 1558 true A01: 19696200-19697757 Brassica rapa FPsc
Brara.A02454 1.0kb upstream 1.0kb upstream 1000 false A01: 19696758-19697757 Brassica rapa FPsc
Brara.A02454 1.0kb downstream 1.0kb downstream 1558 true A01: 19695200-19696757 Brassica rapa FPsc
Brara.A02454 1.0kb downstream 1.0kb downstream 1000 false A01: 19695200-19696199 Brassica rapa FPsc
Brara.A02454 2.0kb upstream 2.0kb upstream 2558 true A01: 19696200-19698757 Brassica rapa FPsc
Brara.A02454 2.0kb upstream 2.0kb upstream 2000 false A01: 19696758-19698757 Brassica rapa FPsc
Brara.A02454 2.0kb downstream 2.0kb downstream 2558 true A01: 19694200-19696757 Brassica rapa FPsc
Brara.A02454 2.0kb downstream 2.0kb downstream 2000 false A01: 19694200-19696199 Brassica rapa FPsc
Brara.A02454 5.0kb upstream 5.0kb upstream 5558 true A01: 19696200-19701757 Brassica rapa FPsc
Brara.A02454 5.0kb upstream 5.0kb upstream 5000 false A01: 19696758-19701757 Brassica rapa FPsc
Brara.A02454 5.0kb downstream 5.0kb downstream 5558 true A01: 19691200-19696757 Brassica rapa FPsc
Brara.A02454 5.0kb downstream 5.0kb downstream 5000 false A01: 19691200-19696199 Brassica rapa FPsc
Brara.A02454 10.0kb upstream 10.0kb upstream 10558 true A01: 19696200-19706757 Brassica rapa FPsc
Brara.A02454 10.0kb upstream 10.0kb upstream 10000 false A01: 19696758-19706757 Brassica rapa FPsc
Brara.A02454 10.0kb downstream 10.0kb downstream 10558 true A01: 19686200-19696757 Brassica rapa FPsc
Brara.A02454 10.0kb downstream 10.0kb downstream 10000 false A01: 19686200-19696199 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352452 5261 Brassicaceae Singleton cluster - no MSA
123791185 5264 Brassicales-Malvales Singleton cluster - no MSA
124350071 5266 SBM View MSA
124181067 5268 Malvidae View MSA
124037939 5270 Rosid View MSA
123753147 5271 Pentapetalae View MSA
122797842 5272 Eudicot View MSA
122048825 5273 Angiosperm View MSA
121351710 5274 Embryophyte View MSA
123427809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier