Gene : Brara.D01356 B. rapa FPsc v1.3
Defline:  (1 of 13) 4.4.1.14 - 1-aminocyclopropane-1-carboxylate synthase / S-adenosyl-L-methionine methylthioadenosine-lyase Genomic Order:  1356
Name:  ? Brara.D01356 Secondary Identifier:  ? PAC:30621730
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ETHYL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7270 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D01356 0.5kb upstream 0.5kb upstream 2491 true A04: 12240653-12243143 Brassica rapa FPsc
Brara.D01356 0.5kb upstream 0.5kb upstream 500 false A04: 12240653-12241152 Brassica rapa FPsc
Brara.D01356 0.5kb downstream 0.5kb downstream 2491 true A04: 12241153-12243643 Brassica rapa FPsc
Brara.D01356 0.5kb downstream 0.5kb downstream 500 false A04: 12243144-12243643 Brassica rapa FPsc
Brara.D01356 1.0kb upstream 1.0kb upstream 2991 true A04: 12240153-12243143 Brassica rapa FPsc
Brara.D01356 1.0kb upstream 1.0kb upstream 1000 false A04: 12240153-12241152 Brassica rapa FPsc
Brara.D01356 1.0kb downstream 1.0kb downstream 2991 true A04: 12241153-12244143 Brassica rapa FPsc
Brara.D01356 1.0kb downstream 1.0kb downstream 1000 false A04: 12243144-12244143 Brassica rapa FPsc
Brara.D01356 2.0kb upstream 2.0kb upstream 3991 true A04: 12239153-12243143 Brassica rapa FPsc
Brara.D01356 2.0kb upstream 2.0kb upstream 2000 false A04: 12239153-12241152 Brassica rapa FPsc
Brara.D01356 2.0kb downstream 2.0kb downstream 3991 true A04: 12241153-12245143 Brassica rapa FPsc
Brara.D01356 2.0kb downstream 2.0kb downstream 2000 false A04: 12243144-12245143 Brassica rapa FPsc
Brara.D01356 5.0kb upstream 5.0kb upstream 6991 true A04: 12236153-12243143 Brassica rapa FPsc
Brara.D01356 5.0kb upstream 5.0kb upstream 5000 false A04: 12236153-12241152 Brassica rapa FPsc
Brara.D01356 5.0kb downstream 5.0kb downstream 6991 true A04: 12241153-12248143 Brassica rapa FPsc
Brara.D01356 5.0kb downstream 5.0kb downstream 5000 false A04: 12243144-12248143 Brassica rapa FPsc
Brara.D01356 10.0kb upstream 10.0kb upstream 11991 true A04: 12231153-12243143 Brassica rapa FPsc
Brara.D01356 10.0kb upstream 10.0kb upstream 10000 false A04: 12231153-12241152 Brassica rapa FPsc
Brara.D01356 10.0kb downstream 10.0kb downstream 11991 true A04: 12241153-12253143 Brassica rapa FPsc
Brara.D01356 10.0kb downstream 10.0kb downstream 10000 false A04: 12243144-12253143 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365167 5261 Brassicaceae View MSA
123798904 5264 Brassicales-Malvales View MSA
124296479 5266 SBM View MSA
124148617 5268 Malvidae View MSA
124066319 5270 Rosid View MSA
123745403 5271 Pentapetalae View MSA
122791160 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier