Gene : Brara.G00198 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.7.7.3 - Pantetheine-phosphate adenylyltransferase / PPAT Genomic Order:  198
Name:  ? Brara.G00198 Secondary Identifier:  ? PAC:30634967
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc COA-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G00198 0.5kb upstream 0.5kb upstream 1979 true A07: 1843226-1845204 Brassica rapa FPsc
Brara.G00198 0.5kb upstream 0.5kb upstream 500 false A07: 1844705-1845204 Brassica rapa FPsc
Brara.G00198 0.5kb downstream 0.5kb downstream 1979 true A07: 1842726-1844704 Brassica rapa FPsc
Brara.G00198 0.5kb downstream 0.5kb downstream 500 false A07: 1842726-1843225 Brassica rapa FPsc
Brara.G00198 1.0kb upstream 1.0kb upstream 2479 true A07: 1843226-1845704 Brassica rapa FPsc
Brara.G00198 1.0kb upstream 1.0kb upstream 1000 false A07: 1844705-1845704 Brassica rapa FPsc
Brara.G00198 1.0kb downstream 1.0kb downstream 2479 true A07: 1842226-1844704 Brassica rapa FPsc
Brara.G00198 1.0kb downstream 1.0kb downstream 1000 false A07: 1842226-1843225 Brassica rapa FPsc
Brara.G00198 2.0kb upstream 2.0kb upstream 3479 true A07: 1843226-1846704 Brassica rapa FPsc
Brara.G00198 2.0kb upstream 2.0kb upstream 2000 false A07: 1844705-1846704 Brassica rapa FPsc
Brara.G00198 2.0kb downstream 2.0kb downstream 3479 true A07: 1841226-1844704 Brassica rapa FPsc
Brara.G00198 2.0kb downstream 2.0kb downstream 2000 false A07: 1841226-1843225 Brassica rapa FPsc
Brara.G00198 5.0kb upstream 5.0kb upstream 6479 true A07: 1843226-1849704 Brassica rapa FPsc
Brara.G00198 5.0kb upstream 5.0kb upstream 5000 false A07: 1844705-1849704 Brassica rapa FPsc
Brara.G00198 5.0kb downstream 5.0kb downstream 6479 true A07: 1838226-1844704 Brassica rapa FPsc
Brara.G00198 5.0kb downstream 5.0kb downstream 5000 false A07: 1838226-1843225 Brassica rapa FPsc
Brara.G00198 10.0kb upstream 10.0kb upstream 11479 true A07: 1843226-1854704 Brassica rapa FPsc
Brara.G00198 10.0kb upstream 10.0kb upstream 10000 false A07: 1844705-1854704 Brassica rapa FPsc
Brara.G00198 10.0kb downstream 10.0kb downstream 11479 true A07: 1833226-1844704 Brassica rapa FPsc
Brara.G00198 10.0kb downstream 10.0kb downstream 10000 false A07: 1833226-1843225 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370429 5261 Brassicaceae View MSA
123835109 5264 Brassicales-Malvales View MSA
124343022 5266 SBM View MSA
124241332 5268 Malvidae View MSA
124064108 5270 Rosid View MSA
123751907 5271 Pentapetalae View MSA
122795383 5272 Eudicot View MSA
122050871 5273 Angiosperm View MSA
121345308 5274 Embryophyte View MSA
123425957 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier