Gene : Brara.D01245 B. rapa FPsc v1.3
Defline:  (1 of 7) PTHR10362//PTHR10362:SF19 - HISTIDINE AMMONIA-LYASE Genomic Order:  1245
Name:  ? Brara.D01245 Secondary Identifier:  ? PAC:30620138
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1121 Brassica rapa FPsc pathologic  
BrapaFPsc PWY1F-467 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7186 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D01245 0.5kb upstream 0.5kb upstream 3075 true A04: 11345642-11348716 Brassica rapa FPsc
Brara.D01245 0.5kb upstream 0.5kb upstream 500 false A04: 11348217-11348716 Brassica rapa FPsc
Brara.D01245 0.5kb downstream 0.5kb downstream 3075 true A04: 11345142-11348216 Brassica rapa FPsc
Brara.D01245 0.5kb downstream 0.5kb downstream 500 false A04: 11345142-11345641 Brassica rapa FPsc
Brara.D01245 1.0kb upstream 1.0kb upstream 3575 true A04: 11345642-11349216 Brassica rapa FPsc
Brara.D01245 1.0kb upstream 1.0kb upstream 1000 false A04: 11348217-11349216 Brassica rapa FPsc
Brara.D01245 1.0kb downstream 1.0kb downstream 3575 true A04: 11344642-11348216 Brassica rapa FPsc
Brara.D01245 1.0kb downstream 1.0kb downstream 1000 false A04: 11344642-11345641 Brassica rapa FPsc
Brara.D01245 2.0kb upstream 2.0kb upstream 4575 true A04: 11345642-11350216 Brassica rapa FPsc
Brara.D01245 2.0kb upstream 2.0kb upstream 2000 false A04: 11348217-11350216 Brassica rapa FPsc
Brara.D01245 2.0kb downstream 2.0kb downstream 4575 true A04: 11343642-11348216 Brassica rapa FPsc
Brara.D01245 2.0kb downstream 2.0kb downstream 2000 false A04: 11343642-11345641 Brassica rapa FPsc
Brara.D01245 5.0kb upstream 5.0kb upstream 7575 true A04: 11345642-11353216 Brassica rapa FPsc
Brara.D01245 5.0kb upstream 5.0kb upstream 5000 false A04: 11348217-11353216 Brassica rapa FPsc
Brara.D01245 5.0kb downstream 5.0kb downstream 7575 true A04: 11340642-11348216 Brassica rapa FPsc
Brara.D01245 5.0kb downstream 5.0kb downstream 5000 false A04: 11340642-11345641 Brassica rapa FPsc
Brara.D01245 10.0kb upstream 10.0kb upstream 12575 true A04: 11345642-11358216 Brassica rapa FPsc
Brara.D01245 10.0kb upstream 10.0kb upstream 10000 false A04: 11348217-11358216 Brassica rapa FPsc
Brara.D01245 10.0kb downstream 10.0kb downstream 12575 true A04: 11335642-11348216 Brassica rapa FPsc
Brara.D01245 10.0kb downstream 10.0kb downstream 10000 false A04: 11335642-11345641 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510395 5273 Angiosperm View MSA
122363337 5261 Brassicaceae View MSA
123798519 5264 Brassicales-Malvales View MSA
124296145 5266 SBM View MSA
124148382 5268 Malvidae View MSA
123874381 5270 Rosid View MSA
123458365 5271 Pentapetalae View MSA
122493771 5272 Eudicot View MSA
120783497 5274 Embryophyte View MSA
122825501 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier