Gene : Brara.G00051 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR10168:SF14 - GLUTAREDOXIN-C5, CHLOROPLASTIC-RELATED Genomic Order:  51
Name:  ? Brara.G00051 Secondary Identifier:  ? PAC:30635088
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc THIOREDOX-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G00051 0.5kb upstream 0.5kb upstream 2085 true A07: 330256-332340 Brassica rapa FPsc
Brara.G00051 0.5kb upstream 0.5kb upstream 500 false A07: 330256-330755 Brassica rapa FPsc
Brara.G00051 0.5kb downstream 0.5kb downstream 2085 true A07: 330756-332840 Brassica rapa FPsc
Brara.G00051 0.5kb downstream 0.5kb downstream 500 false A07: 332341-332840 Brassica rapa FPsc
Brara.G00051 1.0kb upstream 1.0kb upstream 2585 true A07: 329756-332340 Brassica rapa FPsc
Brara.G00051 1.0kb upstream 1.0kb upstream 1000 false A07: 329756-330755 Brassica rapa FPsc
Brara.G00051 1.0kb downstream 1.0kb downstream 2585 true A07: 330756-333340 Brassica rapa FPsc
Brara.G00051 1.0kb downstream 1.0kb downstream 1000 false A07: 332341-333340 Brassica rapa FPsc
Brara.G00051 2.0kb upstream 2.0kb upstream 3585 true A07: 328756-332340 Brassica rapa FPsc
Brara.G00051 2.0kb upstream 2.0kb upstream 2000 false A07: 328756-330755 Brassica rapa FPsc
Brara.G00051 2.0kb downstream 2.0kb downstream 3585 true A07: 330756-334340 Brassica rapa FPsc
Brara.G00051 2.0kb downstream 2.0kb downstream 2000 false A07: 332341-334340 Brassica rapa FPsc
Brara.G00051 5.0kb upstream 5.0kb upstream 6585 true A07: 325756-332340 Brassica rapa FPsc
Brara.G00051 5.0kb upstream 5.0kb upstream 5000 false A07: 325756-330755 Brassica rapa FPsc
Brara.G00051 5.0kb downstream 5.0kb downstream 6585 true A07: 330756-337340 Brassica rapa FPsc
Brara.G00051 5.0kb downstream 5.0kb downstream 5000 false A07: 332341-337340 Brassica rapa FPsc
Brara.G00051 10.0kb upstream 10.0kb upstream 11585 true A07: 320756-332340 Brassica rapa FPsc
Brara.G00051 10.0kb upstream 10.0kb upstream 10000 false A07: 320756-330755 Brassica rapa FPsc
Brara.G00051 10.0kb downstream 10.0kb downstream 11585 true A07: 330756-342340 Brassica rapa FPsc
Brara.G00051 10.0kb downstream 10.0kb downstream 10000 false A07: 332341-342340 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026565 5273 Angiosperm View MSA
122370271 5261 Brassicaceae View MSA
123799928 5264 Brassicales-Malvales View MSA
124297397 5266 SBM View MSA
124252514 5268 Malvidae View MSA
124066843 5270 Rosid View MSA
123737863 5271 Pentapetalae View MSA
122787960 5272 Eudicot View MSA
121350843 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier