Gene : Brara.G00088 B. rapa FPsc v1.3
Defline:  (1 of 5) 1.13.99.1 - Inositol oxygenase / Myo-inositol oxygenase Genomic Order:  88
Name:  ? Brara.G00088 Secondary Identifier:  ? PAC:30632993
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-4841 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G00088 0.5kb upstream 0.5kb upstream 3270 true A07: 660337-663606 Brassica rapa FPsc
Brara.G00088 0.5kb upstream 0.5kb upstream 500 false A07: 663107-663606 Brassica rapa FPsc
Brara.G00088 0.5kb downstream 0.5kb downstream 3270 true A07: 659837-663106 Brassica rapa FPsc
Brara.G00088 0.5kb downstream 0.5kb downstream 500 false A07: 659837-660336 Brassica rapa FPsc
Brara.G00088 1.0kb upstream 1.0kb upstream 3770 true A07: 660337-664106 Brassica rapa FPsc
Brara.G00088 1.0kb upstream 1.0kb upstream 1000 false A07: 663107-664106 Brassica rapa FPsc
Brara.G00088 1.0kb downstream 1.0kb downstream 3770 true A07: 659337-663106 Brassica rapa FPsc
Brara.G00088 1.0kb downstream 1.0kb downstream 1000 false A07: 659337-660336 Brassica rapa FPsc
Brara.G00088 2.0kb upstream 2.0kb upstream 4770 true A07: 660337-665106 Brassica rapa FPsc
Brara.G00088 2.0kb upstream 2.0kb upstream 2000 false A07: 663107-665106 Brassica rapa FPsc
Brara.G00088 2.0kb downstream 2.0kb downstream 4770 true A07: 658337-663106 Brassica rapa FPsc
Brara.G00088 2.0kb downstream 2.0kb downstream 2000 false A07: 658337-660336 Brassica rapa FPsc
Brara.G00088 5.0kb upstream 5.0kb upstream 7770 true A07: 660337-668106 Brassica rapa FPsc
Brara.G00088 5.0kb upstream 5.0kb upstream 5000 false A07: 663107-668106 Brassica rapa FPsc
Brara.G00088 5.0kb downstream 5.0kb downstream 7770 true A07: 655337-663106 Brassica rapa FPsc
Brara.G00088 5.0kb downstream 5.0kb downstream 5000 false A07: 655337-660336 Brassica rapa FPsc
Brara.G00088 10.0kb upstream 10.0kb upstream 12770 true A07: 660337-673106 Brassica rapa FPsc
Brara.G00088 10.0kb upstream 10.0kb upstream 10000 false A07: 663107-673106 Brassica rapa FPsc
Brara.G00088 10.0kb downstream 10.0kb downstream 12770 true A07: 650337-663106 Brassica rapa FPsc
Brara.G00088 10.0kb downstream 10.0kb downstream 10000 false A07: 650337-660336 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366447 5261 Brassicaceae View MSA
123838196 5264 Brassicales-Malvales View MSA
124340567 5266 SBM View MSA
124249980 5268 Malvidae View MSA
124067976 5270 Rosid View MSA
123743695 5271 Pentapetalae View MSA
122796011 5272 Eudicot View MSA
122042225 5273 Angiosperm View MSA
121347706 5274 Embryophyte View MSA
123428319 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier