Gene : Brara.F03910 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR10336:SF105 - PHOSPHOINOSITIDE PHOSPHOLIPASE C 1-RELATED Genomic Order:  3910
Name:  ? Brara.F03910 Secondary Identifier:  ? PAC:30630915
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPASYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6351 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6367 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7039 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03910 0.5kb upstream 0.5kb upstream 2875 true A06: 29252480-29255354 Brassica rapa FPsc
Brara.F03910 0.5kb upstream 0.5kb upstream 500 false A06: 29254855-29255354 Brassica rapa FPsc
Brara.F03910 0.5kb downstream 0.5kb downstream 2875 true A06: 29251980-29254854 Brassica rapa FPsc
Brara.F03910 0.5kb downstream 0.5kb downstream 500 false A06: 29251980-29252479 Brassica rapa FPsc
Brara.F03910 1.0kb upstream 1.0kb upstream 3375 true A06: 29252480-29255854 Brassica rapa FPsc
Brara.F03910 1.0kb upstream 1.0kb upstream 1000 false A06: 29254855-29255854 Brassica rapa FPsc
Brara.F03910 1.0kb downstream 1.0kb downstream 3375 true A06: 29251480-29254854 Brassica rapa FPsc
Brara.F03910 1.0kb downstream 1.0kb downstream 1000 false A06: 29251480-29252479 Brassica rapa FPsc
Brara.F03910 2.0kb upstream 2.0kb upstream 4375 true A06: 29252480-29256854 Brassica rapa FPsc
Brara.F03910 2.0kb upstream 2.0kb upstream 2000 false A06: 29254855-29256854 Brassica rapa FPsc
Brara.F03910 2.0kb downstream 2.0kb downstream 4375 true A06: 29250480-29254854 Brassica rapa FPsc
Brara.F03910 2.0kb downstream 2.0kb downstream 2000 false A06: 29250480-29252479 Brassica rapa FPsc
Brara.F03910 5.0kb upstream 5.0kb upstream 7375 true A06: 29252480-29259854 Brassica rapa FPsc
Brara.F03910 5.0kb upstream 5.0kb upstream 5000 false A06: 29254855-29259854 Brassica rapa FPsc
Brara.F03910 5.0kb downstream 5.0kb downstream 7375 true A06: 29247480-29254854 Brassica rapa FPsc
Brara.F03910 5.0kb downstream 5.0kb downstream 5000 false A06: 29247480-29252479 Brassica rapa FPsc
Brara.F03910 10.0kb upstream 10.0kb upstream 12375 true A06: 29252480-29264854 Brassica rapa FPsc
Brara.F03910 10.0kb upstream 10.0kb upstream 10000 false A06: 29254855-29264854 Brassica rapa FPsc
Brara.F03910 10.0kb downstream 10.0kb downstream 12375 true A06: 29242480-29254854 Brassica rapa FPsc
Brara.F03910 10.0kb downstream 10.0kb downstream 10000 false A06: 29242480-29252479 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361806 5261 Brassicaceae View MSA
123798250 5264 Brassicales-Malvales View MSA
124295917 5266 SBM View MSA
124148223 5268 Malvidae View MSA
123874264 5270 Rosid View MSA
123458265 5271 Pentapetalae View MSA
122796639 5272 Eudicot View MSA
122046719 5273 Angiosperm View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier