Gene : Brara.F03922 B. rapa FPsc v1.3
Defline:  (1 of 1) 2.4.1.101 - Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase / 1,2-N-acetylglucosaminyltransferase Genomic Order:  3922
Name:  ? Brara.F03922 Secondary Identifier:  ? PAC:30631440
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7426 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03922 0.5kb upstream 0.5kb upstream 4193 true A06: 29340492-29344684 Brassica rapa FPsc
Brara.F03922 0.5kb upstream 0.5kb upstream 500 false A06: 29340492-29340991 Brassica rapa FPsc
Brara.F03922 0.5kb downstream 0.5kb downstream 4193 true A06: 29340992-29345184 Brassica rapa FPsc
Brara.F03922 0.5kb downstream 0.5kb downstream 500 false A06: 29344685-29345184 Brassica rapa FPsc
Brara.F03922 1.0kb upstream 1.0kb upstream 4693 true A06: 29339992-29344684 Brassica rapa FPsc
Brara.F03922 1.0kb upstream 1.0kb upstream 1000 false A06: 29339992-29340991 Brassica rapa FPsc
Brara.F03922 1.0kb downstream 1.0kb downstream 4693 true A06: 29340992-29345684 Brassica rapa FPsc
Brara.F03922 1.0kb downstream 1.0kb downstream 1000 false A06: 29344685-29345684 Brassica rapa FPsc
Brara.F03922 2.0kb upstream 2.0kb upstream 5693 true A06: 29338992-29344684 Brassica rapa FPsc
Brara.F03922 2.0kb upstream 2.0kb upstream 2000 false A06: 29338992-29340991 Brassica rapa FPsc
Brara.F03922 2.0kb downstream 2.0kb downstream 5693 true A06: 29340992-29346684 Brassica rapa FPsc
Brara.F03922 2.0kb downstream 2.0kb downstream 2000 false A06: 29344685-29346684 Brassica rapa FPsc
Brara.F03922 5.0kb upstream 5.0kb upstream 8693 true A06: 29335992-29344684 Brassica rapa FPsc
Brara.F03922 5.0kb upstream 5.0kb upstream 5000 false A06: 29335992-29340991 Brassica rapa FPsc
Brara.F03922 5.0kb downstream 5.0kb downstream 8693 true A06: 29340992-29349684 Brassica rapa FPsc
Brara.F03922 5.0kb downstream 5.0kb downstream 5000 false A06: 29344685-29349684 Brassica rapa FPsc
Brara.F03922 10.0kb upstream 10.0kb upstream 13693 true A06: 29330992-29344684 Brassica rapa FPsc
Brara.F03922 10.0kb upstream 10.0kb upstream 10000 false A06: 29330992-29340991 Brassica rapa FPsc
Brara.F03922 10.0kb downstream 10.0kb downstream 13693 true A06: 29340992-29354684 Brassica rapa FPsc
Brara.F03922 10.0kb downstream 10.0kb downstream 10000 false A06: 29344685-29354684 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371542 5261 Brassicaceae View MSA
123831005 5264 Brassicales-Malvales View MSA
124342265 5266 SBM View MSA
124241917 5268 Malvidae View MSA
124064877 5270 Rosid View MSA
123753422 5271 Pentapetalae View MSA
122787194 5272 Eudicot View MSA
122050416 5273 Angiosperm View MSA
121350019 5274 Embryophyte View MSA
123426685 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier