Gene : Brara.A02372 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR13812//PTHR13812:SF20 - ORNITHINE CYCLODEAMINASE-RELATED Genomic Order:  2372
Name:  ? Brara.A02372 Secondary Identifier:  ? PAC:30638020
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5188 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5918 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02372 0.5kb upstream 0.5kb upstream 2660 true A01: 18285386-18288045 Brassica rapa FPsc
Brara.A02372 0.5kb upstream 0.5kb upstream 500 false A01: 18285386-18285885 Brassica rapa FPsc
Brara.A02372 0.5kb downstream 0.5kb downstream 2660 true A01: 18285886-18288545 Brassica rapa FPsc
Brara.A02372 0.5kb downstream 0.5kb downstream 500 false A01: 18288046-18288545 Brassica rapa FPsc
Brara.A02372 1.0kb upstream 1.0kb upstream 3160 true A01: 18284886-18288045 Brassica rapa FPsc
Brara.A02372 1.0kb upstream 1.0kb upstream 1000 false A01: 18284886-18285885 Brassica rapa FPsc
Brara.A02372 1.0kb downstream 1.0kb downstream 3160 true A01: 18285886-18289045 Brassica rapa FPsc
Brara.A02372 1.0kb downstream 1.0kb downstream 1000 false A01: 18288046-18289045 Brassica rapa FPsc
Brara.A02372 2.0kb upstream 2.0kb upstream 4160 true A01: 18283886-18288045 Brassica rapa FPsc
Brara.A02372 2.0kb upstream 2.0kb upstream 2000 false A01: 18283886-18285885 Brassica rapa FPsc
Brara.A02372 2.0kb downstream 2.0kb downstream 4160 true A01: 18285886-18290045 Brassica rapa FPsc
Brara.A02372 2.0kb downstream 2.0kb downstream 2000 false A01: 18288046-18290045 Brassica rapa FPsc
Brara.A02372 5.0kb upstream 5.0kb upstream 7160 true A01: 18280886-18288045 Brassica rapa FPsc
Brara.A02372 5.0kb upstream 5.0kb upstream 5000 false A01: 18280886-18285885 Brassica rapa FPsc
Brara.A02372 5.0kb downstream 5.0kb downstream 7160 true A01: 18285886-18293045 Brassica rapa FPsc
Brara.A02372 5.0kb downstream 5.0kb downstream 5000 false A01: 18288046-18293045 Brassica rapa FPsc
Brara.A02372 10.0kb upstream 10.0kb upstream 12160 true A01: 18275886-18288045 Brassica rapa FPsc
Brara.A02372 10.0kb upstream 10.0kb upstream 10000 false A01: 18275886-18285885 Brassica rapa FPsc
Brara.A02372 10.0kb downstream 10.0kb downstream 12160 true A01: 18285886-18298045 Brassica rapa FPsc
Brara.A02372 10.0kb downstream 10.0kb downstream 10000 false A01: 18288046-18298045 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352550 5261 Brassicaceae Singleton cluster - no MSA
123791268 5264 Brassicales-Malvales Singleton cluster - no MSA
124350051 5266 SBM View MSA
124237055 5268 Malvidae View MSA
124065838 5270 Rosid View MSA
123737748 5271 Pentapetalae View MSA
122790191 5272 Eudicot View MSA
122042343 5273 Angiosperm View MSA
121344593 5274 Embryophyte View MSA
123424931 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier