Gene : Brara.A02192 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR11817:SF28 - PLASTIDIAL PYRUVATE KINASE 4, CHLOROPLASTIC Genomic Order:  2192
Name:  ? Brara.A02192 Secondary Identifier:  ? PAC:30638794
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ANAEROFRUCAT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ANAGLYCOLYSIS-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-1042 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5723 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02192 0.5kb upstream 0.5kb upstream 3794 true A01: 13851156-13854949 Brassica rapa FPsc
Brara.A02192 0.5kb upstream 0.5kb upstream 500 false A01: 13851156-13851655 Brassica rapa FPsc
Brara.A02192 0.5kb downstream 0.5kb downstream 3794 true A01: 13851656-13855449 Brassica rapa FPsc
Brara.A02192 0.5kb downstream 0.5kb downstream 500 false A01: 13854950-13855449 Brassica rapa FPsc
Brara.A02192 1.0kb upstream 1.0kb upstream 4294 true A01: 13850656-13854949 Brassica rapa FPsc
Brara.A02192 1.0kb upstream 1.0kb upstream 1000 false A01: 13850656-13851655 Brassica rapa FPsc
Brara.A02192 1.0kb downstream 1.0kb downstream 4294 true A01: 13851656-13855949 Brassica rapa FPsc
Brara.A02192 1.0kb downstream 1.0kb downstream 1000 false A01: 13854950-13855949 Brassica rapa FPsc
Brara.A02192 2.0kb upstream 2.0kb upstream 5294 true A01: 13849656-13854949 Brassica rapa FPsc
Brara.A02192 2.0kb upstream 2.0kb upstream 2000 false A01: 13849656-13851655 Brassica rapa FPsc
Brara.A02192 2.0kb downstream 2.0kb downstream 5294 true A01: 13851656-13856949 Brassica rapa FPsc
Brara.A02192 2.0kb downstream 2.0kb downstream 2000 false A01: 13854950-13856949 Brassica rapa FPsc
Brara.A02192 5.0kb upstream 5.0kb upstream 8294 true A01: 13846656-13854949 Brassica rapa FPsc
Brara.A02192 5.0kb upstream 5.0kb upstream 5000 false A01: 13846656-13851655 Brassica rapa FPsc
Brara.A02192 5.0kb downstream 5.0kb downstream 8294 true A01: 13851656-13859949 Brassica rapa FPsc
Brara.A02192 5.0kb downstream 5.0kb downstream 5000 false A01: 13854950-13859949 Brassica rapa FPsc
Brara.A02192 10.0kb upstream 10.0kb upstream 13294 true A01: 13841656-13854949 Brassica rapa FPsc
Brara.A02192 10.0kb upstream 10.0kb upstream 10000 false A01: 13841656-13851655 Brassica rapa FPsc
Brara.A02192 10.0kb downstream 10.0kb downstream 13294 true A01: 13851656-13864949 Brassica rapa FPsc
Brara.A02192 10.0kb downstream 10.0kb downstream 10000 false A01: 13854950-13864949 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364303 5261 Brassicaceae View MSA
123833815 5264 Brassicales-Malvales View MSA
124344183 5266 SBM View MSA
124244413 5268 Malvidae View MSA
124068114 5270 Rosid View MSA
123738415 5271 Pentapetalae View MSA
122787981 5272 Eudicot View MSA
122044331 5273 Angiosperm View MSA
121346943 5274 Embryophyte View MSA
123380469 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier