Gene : Brara.D01185 B. rapa FPsc v1.3
Defline:  (1 of 7) 4.1.1.39 - Ribulose-bisphosphate carboxylase / RuBP carboxylase Genomic Order:  1185
Name:  ? Brara.D01185 Secondary Identifier:  ? PAC:30622971
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CALVIN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PHOTOALL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5723 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D01185 0.5kb upstream 0.5kb upstream 1887 true A04: 10890031-10891917 Brassica rapa FPsc
Brara.D01185 0.5kb upstream 0.5kb upstream 500 false A04: 10890031-10890530 Brassica rapa FPsc
Brara.D01185 0.5kb downstream 0.5kb downstream 1887 true A04: 10890531-10892417 Brassica rapa FPsc
Brara.D01185 0.5kb downstream 0.5kb downstream 500 false A04: 10891918-10892417 Brassica rapa FPsc
Brara.D01185 1.0kb upstream 1.0kb upstream 2387 true A04: 10889531-10891917 Brassica rapa FPsc
Brara.D01185 1.0kb upstream 1.0kb upstream 1000 false A04: 10889531-10890530 Brassica rapa FPsc
Brara.D01185 1.0kb downstream 1.0kb downstream 2387 true A04: 10890531-10892917 Brassica rapa FPsc
Brara.D01185 1.0kb downstream 1.0kb downstream 1000 false A04: 10891918-10892917 Brassica rapa FPsc
Brara.D01185 2.0kb upstream 2.0kb upstream 3387 true A04: 10888531-10891917 Brassica rapa FPsc
Brara.D01185 2.0kb upstream 2.0kb upstream 2000 false A04: 10888531-10890530 Brassica rapa FPsc
Brara.D01185 2.0kb downstream 2.0kb downstream 3387 true A04: 10890531-10893917 Brassica rapa FPsc
Brara.D01185 2.0kb downstream 2.0kb downstream 2000 false A04: 10891918-10893917 Brassica rapa FPsc
Brara.D01185 5.0kb upstream 5.0kb upstream 6387 true A04: 10885531-10891917 Brassica rapa FPsc
Brara.D01185 5.0kb upstream 5.0kb upstream 5000 false A04: 10885531-10890530 Brassica rapa FPsc
Brara.D01185 5.0kb downstream 5.0kb downstream 6387 true A04: 10890531-10896917 Brassica rapa FPsc
Brara.D01185 5.0kb downstream 5.0kb downstream 5000 false A04: 10891918-10896917 Brassica rapa FPsc
Brara.D01185 10.0kb upstream 10.0kb upstream 11387 true A04: 10880531-10891917 Brassica rapa FPsc
Brara.D01185 10.0kb upstream 10.0kb upstream 10000 false A04: 10880531-10890530 Brassica rapa FPsc
Brara.D01185 10.0kb downstream 10.0kb downstream 11387 true A04: 10890531-10901917 Brassica rapa FPsc
Brara.D01185 10.0kb downstream 10.0kb downstream 10000 false A04: 10891918-10901917 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380509 5261 Brassicaceae View MSA
123836682 5264 Brassicales-Malvales View MSA
124340616 5266 SBM View MSA
124250367 5268 Malvidae View MSA
124066802 5270 Rosid View MSA
123747186 5271 Pentapetalae View MSA
122796864 5272 Eudicot View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier