Gene : Brara.F03722 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR14237:SF30 - MITOCHONDRIAL AMIDOXIME-REDUCING COMPONENT 1 Genomic Order:  3722
Name:  ? Brara.F03722 Secondary Identifier:  ? PAC:30630773
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5963 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03722 0.5kb upstream 0.5kb upstream 2334 true A06: 28249368-28251701 Brassica rapa FPsc
Brara.F03722 0.5kb upstream 0.5kb upstream 500 false A06: 28251202-28251701 Brassica rapa FPsc
Brara.F03722 0.5kb downstream 0.5kb downstream 2334 true A06: 28248868-28251201 Brassica rapa FPsc
Brara.F03722 0.5kb downstream 0.5kb downstream 500 false A06: 28248868-28249367 Brassica rapa FPsc
Brara.F03722 1.0kb upstream 1.0kb upstream 2834 true A06: 28249368-28252201 Brassica rapa FPsc
Brara.F03722 1.0kb upstream 1.0kb upstream 1000 false A06: 28251202-28252201 Brassica rapa FPsc
Brara.F03722 1.0kb downstream 1.0kb downstream 2834 true A06: 28248368-28251201 Brassica rapa FPsc
Brara.F03722 1.0kb downstream 1.0kb downstream 1000 false A06: 28248368-28249367 Brassica rapa FPsc
Brara.F03722 2.0kb upstream 2.0kb upstream 3834 true A06: 28249368-28253201 Brassica rapa FPsc
Brara.F03722 2.0kb upstream 2.0kb upstream 2000 false A06: 28251202-28253201 Brassica rapa FPsc
Brara.F03722 2.0kb downstream 2.0kb downstream 3834 true A06: 28247368-28251201 Brassica rapa FPsc
Brara.F03722 2.0kb downstream 2.0kb downstream 2000 false A06: 28247368-28249367 Brassica rapa FPsc
Brara.F03722 5.0kb upstream 5.0kb upstream 6834 true A06: 28249368-28256201 Brassica rapa FPsc
Brara.F03722 5.0kb upstream 5.0kb upstream 5000 false A06: 28251202-28256201 Brassica rapa FPsc
Brara.F03722 5.0kb downstream 5.0kb downstream 6834 true A06: 28244368-28251201 Brassica rapa FPsc
Brara.F03722 5.0kb downstream 5.0kb downstream 5000 false A06: 28244368-28249367 Brassica rapa FPsc
Brara.F03722 10.0kb upstream 10.0kb upstream 11834 true A06: 28249368-28261201 Brassica rapa FPsc
Brara.F03722 10.0kb upstream 10.0kb upstream 10000 false A06: 28251202-28261201 Brassica rapa FPsc
Brara.F03722 10.0kb downstream 10.0kb downstream 11834 true A06: 28239368-28251201 Brassica rapa FPsc
Brara.F03722 10.0kb downstream 10.0kb downstream 10000 false A06: 28239368-28249367 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368113 5261 Brassicaceae View MSA
123799491 5264 Brassicales-Malvales View MSA
124297007 5266 SBM View MSA
124149007 5268 Malvidae View MSA
123874897 5270 Rosid View MSA
123458805 5271 Pentapetalae View MSA
122494203 5272 Eudicot View MSA
122043484 5273 Angiosperm View MSA
123428941 5275 Viridiplantae View MSA
121347613 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier