Gene : Brara.A02270 B. rapa FPsc v1.3
Defline:  (1 of 7) PTHR32266:SF12 - NICOTIANAMINE SYNTHASE-RELATED Genomic Order:  2270
Name:  ? Brara.A02270 Secondary Identifier:  ? PAC:30638434
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5957 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02270 0.5kb upstream 0.5kb upstream 1853 true A01: 15773601-15775453 Brassica rapa FPsc
Brara.A02270 0.5kb upstream 0.5kb upstream 500 false A01: 15773601-15774100 Brassica rapa FPsc
Brara.A02270 0.5kb downstream 0.5kb downstream 1853 true A01: 15774101-15775953 Brassica rapa FPsc
Brara.A02270 0.5kb downstream 0.5kb downstream 500 false A01: 15775454-15775953 Brassica rapa FPsc
Brara.A02270 1.0kb upstream 1.0kb upstream 2353 true A01: 15773101-15775453 Brassica rapa FPsc
Brara.A02270 1.0kb upstream 1.0kb upstream 1000 false A01: 15773101-15774100 Brassica rapa FPsc
Brara.A02270 1.0kb downstream 1.0kb downstream 2353 true A01: 15774101-15776453 Brassica rapa FPsc
Brara.A02270 1.0kb downstream 1.0kb downstream 1000 false A01: 15775454-15776453 Brassica rapa FPsc
Brara.A02270 2.0kb upstream 2.0kb upstream 3353 true A01: 15772101-15775453 Brassica rapa FPsc
Brara.A02270 2.0kb upstream 2.0kb upstream 2000 false A01: 15772101-15774100 Brassica rapa FPsc
Brara.A02270 2.0kb downstream 2.0kb downstream 3353 true A01: 15774101-15777453 Brassica rapa FPsc
Brara.A02270 2.0kb downstream 2.0kb downstream 2000 false A01: 15775454-15777453 Brassica rapa FPsc
Brara.A02270 5.0kb upstream 5.0kb upstream 6353 true A01: 15769101-15775453 Brassica rapa FPsc
Brara.A02270 5.0kb upstream 5.0kb upstream 5000 false A01: 15769101-15774100 Brassica rapa FPsc
Brara.A02270 5.0kb downstream 5.0kb downstream 6353 true A01: 15774101-15780453 Brassica rapa FPsc
Brara.A02270 5.0kb downstream 5.0kb downstream 5000 false A01: 15775454-15780453 Brassica rapa FPsc
Brara.A02270 10.0kb upstream 10.0kb upstream 11353 true A01: 15764101-15775453 Brassica rapa FPsc
Brara.A02270 10.0kb upstream 10.0kb upstream 10000 false A01: 15764101-15774100 Brassica rapa FPsc
Brara.A02270 10.0kb downstream 10.0kb downstream 11353 true A01: 15774101-15785453 Brassica rapa FPsc
Brara.A02270 10.0kb downstream 10.0kb downstream 10000 false A01: 15775454-15785453 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375018 5261 Brassicaceae View MSA
123839156 5264 Brassicales-Malvales View MSA
124346963 5266 SBM View MSA
124238052 5268 Malvidae View MSA
124066045 5270 Rosid View MSA
123750791 5271 Pentapetalae View MSA
122792107 5272 Eudicot View MSA
122044478 5273 Angiosperm View MSA
121350055 5274 Embryophyte View MSA
123381558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier