Gene : Brara.F03767 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR33447:SF2 - PROTEIN PCS-1, ISOFORM A Genomic Order:  3767
Name:  ? Brara.F03767 Secondary Identifier:  ? PAC:30629493
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6745 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03767 0.5kb upstream 0.5kb upstream 3210 true A06: 28485488-28488697 Brassica rapa FPsc
Brara.F03767 0.5kb upstream 0.5kb upstream 500 false A06: 28488198-28488697 Brassica rapa FPsc
Brara.F03767 0.5kb downstream 0.5kb downstream 3210 true A06: 28484988-28488197 Brassica rapa FPsc
Brara.F03767 0.5kb downstream 0.5kb downstream 500 false A06: 28484988-28485487 Brassica rapa FPsc
Brara.F03767 1.0kb upstream 1.0kb upstream 3710 true A06: 28485488-28489197 Brassica rapa FPsc
Brara.F03767 1.0kb upstream 1.0kb upstream 1000 false A06: 28488198-28489197 Brassica rapa FPsc
Brara.F03767 1.0kb downstream 1.0kb downstream 3710 true A06: 28484488-28488197 Brassica rapa FPsc
Brara.F03767 1.0kb downstream 1.0kb downstream 1000 false A06: 28484488-28485487 Brassica rapa FPsc
Brara.F03767 2.0kb upstream 2.0kb upstream 4710 true A06: 28485488-28490197 Brassica rapa FPsc
Brara.F03767 2.0kb upstream 2.0kb upstream 2000 false A06: 28488198-28490197 Brassica rapa FPsc
Brara.F03767 2.0kb downstream 2.0kb downstream 4710 true A06: 28483488-28488197 Brassica rapa FPsc
Brara.F03767 2.0kb downstream 2.0kb downstream 2000 false A06: 28483488-28485487 Brassica rapa FPsc
Brara.F03767 5.0kb upstream 5.0kb upstream 7710 true A06: 28485488-28493197 Brassica rapa FPsc
Brara.F03767 5.0kb upstream 5.0kb upstream 5000 false A06: 28488198-28493197 Brassica rapa FPsc
Brara.F03767 5.0kb downstream 5.0kb downstream 7710 true A06: 28480488-28488197 Brassica rapa FPsc
Brara.F03767 5.0kb downstream 5.0kb downstream 5000 false A06: 28480488-28485487 Brassica rapa FPsc
Brara.F03767 10.0kb upstream 10.0kb upstream 12710 true A06: 28485488-28498197 Brassica rapa FPsc
Brara.F03767 10.0kb upstream 10.0kb upstream 10000 false A06: 28488198-28498197 Brassica rapa FPsc
Brara.F03767 10.0kb downstream 10.0kb downstream 12710 true A06: 28475488-28488197 Brassica rapa FPsc
Brara.F03767 10.0kb downstream 10.0kb downstream 10000 false A06: 28475488-28485487 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370507 5261 Brassicaceae View MSA
123834332 5264 Brassicales-Malvales View MSA
124346208 5266 SBM View MSA
124237601 5268 Malvidae View MSA
124068686 5270 Rosid View MSA
123741810 5271 Pentapetalae View MSA
122787952 5272 Eudicot View MSA
122042106 5273 Angiosperm View MSA
123429015 5275 Viridiplantae View MSA
121309923 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier