Gene : Brara.D01658 B. rapa FPsc v1.3
Defline:  (1 of 1) 2.5.1.75//2.5.1.8 - tRNA dimethylallyltransferase / tRNA prenyltransferase Genomic Order:  1658
Name:  ? Brara.D01658 Secondary Identifier:  ? PAC:30620987
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-2781 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D01658 0.5kb upstream 0.5kb upstream 2772 true A04: 14537589-14540360 Brassica rapa FPsc
Brara.D01658 0.5kb upstream 0.5kb upstream 500 false A04: 14537589-14538088 Brassica rapa FPsc
Brara.D01658 0.5kb downstream 0.5kb downstream 2772 true A04: 14538089-14540860 Brassica rapa FPsc
Brara.D01658 0.5kb downstream 0.5kb downstream 500 false A04: 14540361-14540860 Brassica rapa FPsc
Brara.D01658 1.0kb upstream 1.0kb upstream 3272 true A04: 14537089-14540360 Brassica rapa FPsc
Brara.D01658 1.0kb upstream 1.0kb upstream 1000 false A04: 14537089-14538088 Brassica rapa FPsc
Brara.D01658 1.0kb downstream 1.0kb downstream 3272 true A04: 14538089-14541360 Brassica rapa FPsc
Brara.D01658 1.0kb downstream 1.0kb downstream 1000 false A04: 14540361-14541360 Brassica rapa FPsc
Brara.D01658 2.0kb upstream 2.0kb upstream 4272 true A04: 14536089-14540360 Brassica rapa FPsc
Brara.D01658 2.0kb upstream 2.0kb upstream 2000 false A04: 14536089-14538088 Brassica rapa FPsc
Brara.D01658 2.0kb downstream 2.0kb downstream 4272 true A04: 14538089-14542360 Brassica rapa FPsc
Brara.D01658 2.0kb downstream 2.0kb downstream 2000 false A04: 14540361-14542360 Brassica rapa FPsc
Brara.D01658 5.0kb upstream 5.0kb upstream 7272 true A04: 14533089-14540360 Brassica rapa FPsc
Brara.D01658 5.0kb upstream 5.0kb upstream 5000 false A04: 14533089-14538088 Brassica rapa FPsc
Brara.D01658 5.0kb downstream 5.0kb downstream 7272 true A04: 14538089-14545360 Brassica rapa FPsc
Brara.D01658 5.0kb downstream 5.0kb downstream 5000 false A04: 14540361-14545360 Brassica rapa FPsc
Brara.D01658 10.0kb upstream 10.0kb upstream 12272 true A04: 14528089-14540360 Brassica rapa FPsc
Brara.D01658 10.0kb upstream 10.0kb upstream 10000 false A04: 14528089-14538088 Brassica rapa FPsc
Brara.D01658 10.0kb downstream 10.0kb downstream 12272 true A04: 14538089-14550360 Brassica rapa FPsc
Brara.D01658 10.0kb downstream 10.0kb downstream 10000 false A04: 14540361-14550360 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368424 5261 Brassicaceae View MSA
123829881 5264 Brassicales-Malvales View MSA
124341186 5266 SBM View MSA
124237020 5268 Malvidae View MSA
124061128 5270 Rosid View MSA
123740850 5271 Pentapetalae View MSA
122786758 5272 Eudicot View MSA
122043118 5273 Angiosperm View MSA
121350682 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier