Gene : Brara.G01405 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.6.1.85 - Aminodeoxychorismate synthase / ADC synthase Genomic Order:  1405
Name:  ? Brara.G01405 Secondary Identifier:  ? PAC:30635214
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6543 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6612 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01405 0.5kb upstream 0.5kb upstream 5049 true A07: 14505048-14510096 Brassica rapa FPsc
Brara.G01405 0.5kb upstream 0.5kb upstream 500 false A07: 14509597-14510096 Brassica rapa FPsc
Brara.G01405 0.5kb downstream 0.5kb downstream 5049 true A07: 14504548-14509596 Brassica rapa FPsc
Brara.G01405 0.5kb downstream 0.5kb downstream 500 false A07: 14504548-14505047 Brassica rapa FPsc
Brara.G01405 1.0kb upstream 1.0kb upstream 5549 true A07: 14505048-14510596 Brassica rapa FPsc
Brara.G01405 1.0kb upstream 1.0kb upstream 1000 false A07: 14509597-14510596 Brassica rapa FPsc
Brara.G01405 1.0kb downstream 1.0kb downstream 5549 true A07: 14504048-14509596 Brassica rapa FPsc
Brara.G01405 1.0kb downstream 1.0kb downstream 1000 false A07: 14504048-14505047 Brassica rapa FPsc
Brara.G01405 2.0kb upstream 2.0kb upstream 6549 true A07: 14505048-14511596 Brassica rapa FPsc
Brara.G01405 2.0kb upstream 2.0kb upstream 2000 false A07: 14509597-14511596 Brassica rapa FPsc
Brara.G01405 2.0kb downstream 2.0kb downstream 6549 true A07: 14503048-14509596 Brassica rapa FPsc
Brara.G01405 2.0kb downstream 2.0kb downstream 2000 false A07: 14503048-14505047 Brassica rapa FPsc
Brara.G01405 5.0kb upstream 5.0kb upstream 9549 true A07: 14505048-14514596 Brassica rapa FPsc
Brara.G01405 5.0kb upstream 5.0kb upstream 5000 false A07: 14509597-14514596 Brassica rapa FPsc
Brara.G01405 5.0kb downstream 5.0kb downstream 9549 true A07: 14500048-14509596 Brassica rapa FPsc
Brara.G01405 5.0kb downstream 5.0kb downstream 5000 false A07: 14500048-14505047 Brassica rapa FPsc
Brara.G01405 10.0kb upstream 10.0kb upstream 14549 true A07: 14505048-14519596 Brassica rapa FPsc
Brara.G01405 10.0kb upstream 10.0kb upstream 10000 false A07: 14509597-14519596 Brassica rapa FPsc
Brara.G01405 10.0kb downstream 10.0kb downstream 14549 true A07: 14495048-14509596 Brassica rapa FPsc
Brara.G01405 10.0kb downstream 10.0kb downstream 10000 false A07: 14495048-14505047 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374835 5261 Brassicaceae View MSA
123834238 5264 Brassicales-Malvales View MSA
124342580 5266 SBM View MSA
124243371 5268 Malvidae View MSA
124072524 5270 Rosid View MSA
123738750 5271 Pentapetalae View MSA
122789996 5272 Eudicot View MSA
122041819 5273 Angiosperm View MSA
121349343 5274 Embryophyte View MSA
123425375 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier