Gene : Brara.A02977 B. rapa FPsc v1.3

Defline:  (1 of 4) PTHR12701:SF20 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MIG5 Genomic Order:  2977
Name:  ? Brara.A02977 Secondary Identifier:  ? PAC:30636711

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02977 0.5kb upstream 0.5kb upstream 1919 true A01: 25304622-25306540 Brassica rapa FPsc
Brara.A02977 0.5kb upstream 0.5kb upstream 500 false A01: 25306041-25306540 Brassica rapa FPsc
Brara.A02977 0.5kb downstream 0.5kb downstream 1919 true A01: 25304122-25306040 Brassica rapa FPsc
Brara.A02977 0.5kb downstream 0.5kb downstream 500 false A01: 25304122-25304621 Brassica rapa FPsc
Brara.A02977 1.0kb upstream 1.0kb upstream 2419 true A01: 25304622-25307040 Brassica rapa FPsc
Brara.A02977 1.0kb upstream 1.0kb upstream 1000 false A01: 25306041-25307040 Brassica rapa FPsc
Brara.A02977 1.0kb downstream 1.0kb downstream 2419 true A01: 25303622-25306040 Brassica rapa FPsc
Brara.A02977 1.0kb downstream 1.0kb downstream 1000 false A01: 25303622-25304621 Brassica rapa FPsc
Brara.A02977 2.0kb upstream 2.0kb upstream 3419 true A01: 25304622-25308040 Brassica rapa FPsc
Brara.A02977 2.0kb upstream 2.0kb upstream 2000 false A01: 25306041-25308040 Brassica rapa FPsc
Brara.A02977 2.0kb downstream 2.0kb downstream 3419 true A01: 25302622-25306040 Brassica rapa FPsc
Brara.A02977 2.0kb downstream 2.0kb downstream 2000 false A01: 25302622-25304621 Brassica rapa FPsc
Brara.A02977 5.0kb upstream 5.0kb upstream 6419 true A01: 25304622-25311040 Brassica rapa FPsc
Brara.A02977 5.0kb upstream 5.0kb upstream 5000 false A01: 25306041-25311040 Brassica rapa FPsc
Brara.A02977 5.0kb downstream 5.0kb downstream 6419 true A01: 25299622-25306040 Brassica rapa FPsc
Brara.A02977 5.0kb downstream 5.0kb downstream 5000 false A01: 25299622-25304621 Brassica rapa FPsc
Brara.A02977 10.0kb upstream 10.0kb upstream 11419 true A01: 25304622-25316040 Brassica rapa FPsc
Brara.A02977 10.0kb upstream 10.0kb upstream 10000 false A01: 25306041-25316040 Brassica rapa FPsc
Brara.A02977 10.0kb downstream 10.0kb downstream 11419 true A01: 25294622-25306040 Brassica rapa FPsc
Brara.A02977 10.0kb downstream 10.0kb downstream 10000 false A01: 25294622-25304621 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380322 5261 Brassicaceae View MSA
123836533 5264 Brassicales-Malvales View MSA
124342792 5266 SBM View MSA
124251721 5268 Malvidae View MSA
124061614 5270 Rosid View MSA
123738808 5271 Pentapetalae View MSA
122789098 5272 Eudicot View MSA
122042109 5273 Angiosperm View MSA
121344883 5274 Embryophyte View MSA
123380122 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier