Gene : Brara.G01422 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR23012//PTHR23012:SF89 - MEMBRANE ASSOCIATED RING FINGER Genomic Order:  1422
Name:  ? Brara.G01422 Secondary Identifier:  ? PAC:30634597
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01422 0.5kb upstream 0.5kb upstream 1885 true A07: 14608356-14610240 Brassica rapa FPsc
Brara.G01422 0.5kb upstream 0.5kb upstream 500 false A07: 14608356-14608855 Brassica rapa FPsc
Brara.G01422 0.5kb downstream 0.5kb downstream 1885 true A07: 14608856-14610740 Brassica rapa FPsc
Brara.G01422 0.5kb downstream 0.5kb downstream 500 false A07: 14610241-14610740 Brassica rapa FPsc
Brara.G01422 1.0kb upstream 1.0kb upstream 2385 true A07: 14607856-14610240 Brassica rapa FPsc
Brara.G01422 1.0kb upstream 1.0kb upstream 1000 false A07: 14607856-14608855 Brassica rapa FPsc
Brara.G01422 1.0kb downstream 1.0kb downstream 2385 true A07: 14608856-14611240 Brassica rapa FPsc
Brara.G01422 1.0kb downstream 1.0kb downstream 1000 false A07: 14610241-14611240 Brassica rapa FPsc
Brara.G01422 2.0kb upstream 2.0kb upstream 3385 true A07: 14606856-14610240 Brassica rapa FPsc
Brara.G01422 2.0kb upstream 2.0kb upstream 2000 false A07: 14606856-14608855 Brassica rapa FPsc
Brara.G01422 2.0kb downstream 2.0kb downstream 3385 true A07: 14608856-14612240 Brassica rapa FPsc
Brara.G01422 2.0kb downstream 2.0kb downstream 2000 false A07: 14610241-14612240 Brassica rapa FPsc
Brara.G01422 5.0kb upstream 5.0kb upstream 6385 true A07: 14603856-14610240 Brassica rapa FPsc
Brara.G01422 5.0kb upstream 5.0kb upstream 5000 false A07: 14603856-14608855 Brassica rapa FPsc
Brara.G01422 5.0kb downstream 5.0kb downstream 6385 true A07: 14608856-14615240 Brassica rapa FPsc
Brara.G01422 5.0kb downstream 5.0kb downstream 5000 false A07: 14610241-14615240 Brassica rapa FPsc
Brara.G01422 10.0kb upstream 10.0kb upstream 11385 true A07: 14598856-14610240 Brassica rapa FPsc
Brara.G01422 10.0kb upstream 10.0kb upstream 10000 false A07: 14598856-14608855 Brassica rapa FPsc
Brara.G01422 10.0kb downstream 10.0kb downstream 11385 true A07: 14608856-14620240 Brassica rapa FPsc
Brara.G01422 10.0kb downstream 10.0kb downstream 10000 false A07: 14610241-14620240 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041328 5273 Angiosperm View MSA
122372334 5261 Brassicaceae View MSA
123800339 5264 Brassicales-Malvales View MSA
124297760 5266 SBM View MSA
124250999 5268 Malvidae View MSA
124072667 5270 Rosid View MSA
123750896 5271 Pentapetalae View MSA
122789616 5272 Eudicot View MSA
121309830 5274 Embryophyte View MSA
123428817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier