Gene : Brara.G01261 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR11247:SF25 - LIPID PHOSPHATE PHOSPHATASE EPSILON 1, CHLOROPLASTIC-RELATED Genomic Order:  1261
Name:  ? Brara.G01261 Secondary Identifier:  ? PAC:30631979
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc TRIGLSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01261 0.5kb upstream 0.5kb upstream 1809 true A07: 13329183-13330991 Brassica rapa FPsc
Brara.G01261 0.5kb upstream 0.5kb upstream 500 false A07: 13330492-13330991 Brassica rapa FPsc
Brara.G01261 0.5kb downstream 0.5kb downstream 1809 true A07: 13328683-13330491 Brassica rapa FPsc
Brara.G01261 0.5kb downstream 0.5kb downstream 500 false A07: 13328683-13329182 Brassica rapa FPsc
Brara.G01261 1.0kb upstream 1.0kb upstream 2309 true A07: 13329183-13331491 Brassica rapa FPsc
Brara.G01261 1.0kb upstream 1.0kb upstream 1000 false A07: 13330492-13331491 Brassica rapa FPsc
Brara.G01261 1.0kb downstream 1.0kb downstream 2309 true A07: 13328183-13330491 Brassica rapa FPsc
Brara.G01261 1.0kb downstream 1.0kb downstream 1000 false A07: 13328183-13329182 Brassica rapa FPsc
Brara.G01261 2.0kb upstream 2.0kb upstream 3309 true A07: 13329183-13332491 Brassica rapa FPsc
Brara.G01261 2.0kb upstream 2.0kb upstream 2000 false A07: 13330492-13332491 Brassica rapa FPsc
Brara.G01261 2.0kb downstream 2.0kb downstream 3309 true A07: 13327183-13330491 Brassica rapa FPsc
Brara.G01261 2.0kb downstream 2.0kb downstream 2000 false A07: 13327183-13329182 Brassica rapa FPsc
Brara.G01261 5.0kb upstream 5.0kb upstream 6309 true A07: 13329183-13335491 Brassica rapa FPsc
Brara.G01261 5.0kb upstream 5.0kb upstream 5000 false A07: 13330492-13335491 Brassica rapa FPsc
Brara.G01261 5.0kb downstream 5.0kb downstream 6309 true A07: 13324183-13330491 Brassica rapa FPsc
Brara.G01261 5.0kb downstream 5.0kb downstream 5000 false A07: 13324183-13329182 Brassica rapa FPsc
Brara.G01261 10.0kb upstream 10.0kb upstream 11309 true A07: 13329183-13340491 Brassica rapa FPsc
Brara.G01261 10.0kb upstream 10.0kb upstream 10000 false A07: 13330492-13340491 Brassica rapa FPsc
Brara.G01261 10.0kb downstream 10.0kb downstream 11309 true A07: 13319183-13330491 Brassica rapa FPsc
Brara.G01261 10.0kb downstream 10.0kb downstream 10000 false A07: 13319183-13329182 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381312 5261 Brassicaceae View MSA
123838864 5264 Brassicales-Malvales View MSA
124340744 5266 SBM View MSA
124241187 5268 Malvidae View MSA
124066688 5270 Rosid View MSA
123737697 5271 Pentapetalae View MSA
122792032 5272 Eudicot View MSA
122049888 5273 Angiosperm View MSA
121311632 5274 Embryophyte View MSA
123426780 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier