Gene : Brara.D01680 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Genomic Order:  1680
Name:  ? Brara.D01680 Secondary Identifier:  ? PAC:30621858
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5980 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D01680 0.5kb upstream 0.5kb upstream 2595 true A04: 14702627-14705221 Brassica rapa FPsc
Brara.D01680 0.5kb upstream 0.5kb upstream 500 false A04: 14704722-14705221 Brassica rapa FPsc
Brara.D01680 0.5kb downstream 0.5kb downstream 2595 true A04: 14702127-14704721 Brassica rapa FPsc
Brara.D01680 0.5kb downstream 0.5kb downstream 500 false A04: 14702127-14702626 Brassica rapa FPsc
Brara.D01680 1.0kb upstream 1.0kb upstream 3095 true A04: 14702627-14705721 Brassica rapa FPsc
Brara.D01680 1.0kb upstream 1.0kb upstream 1000 false A04: 14704722-14705721 Brassica rapa FPsc
Brara.D01680 1.0kb downstream 1.0kb downstream 3095 true A04: 14701627-14704721 Brassica rapa FPsc
Brara.D01680 1.0kb downstream 1.0kb downstream 1000 false A04: 14701627-14702626 Brassica rapa FPsc
Brara.D01680 2.0kb upstream 2.0kb upstream 4095 true A04: 14702627-14706721 Brassica rapa FPsc
Brara.D01680 2.0kb upstream 2.0kb upstream 2000 false A04: 14704722-14706721 Brassica rapa FPsc
Brara.D01680 2.0kb downstream 2.0kb downstream 4095 true A04: 14700627-14704721 Brassica rapa FPsc
Brara.D01680 2.0kb downstream 2.0kb downstream 2000 false A04: 14700627-14702626 Brassica rapa FPsc
Brara.D01680 5.0kb upstream 5.0kb upstream 7095 true A04: 14702627-14709721 Brassica rapa FPsc
Brara.D01680 5.0kb upstream 5.0kb upstream 5000 false A04: 14704722-14709721 Brassica rapa FPsc
Brara.D01680 5.0kb downstream 5.0kb downstream 7095 true A04: 14697627-14704721 Brassica rapa FPsc
Brara.D01680 5.0kb downstream 5.0kb downstream 5000 false A04: 14697627-14702626 Brassica rapa FPsc
Brara.D01680 10.0kb upstream 10.0kb upstream 12095 true A04: 14702627-14714721 Brassica rapa FPsc
Brara.D01680 10.0kb upstream 10.0kb upstream 10000 false A04: 14704722-14714721 Brassica rapa FPsc
Brara.D01680 10.0kb downstream 10.0kb downstream 12095 true A04: 14692627-14704721 Brassica rapa FPsc
Brara.D01680 10.0kb downstream 10.0kb downstream 10000 false A04: 14692627-14702626 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377762 5261 Brassicaceae View MSA
123836741 5264 Brassicales-Malvales View MSA
124339528 5266 SBM View MSA
124254055 5268 Malvidae View MSA
124063526 5270 Rosid View MSA
123741698 5271 Pentapetalae View MSA
122788923 5272 Eudicot View MSA
122042963 5273 Angiosperm View MSA
121350379 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier